Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal7g1289 | ATGGAGAAGAAAAAAGTTACCGTTCCGCTTGTGTGCCACGGTCATTCTCGCCCAGTGGTCGATCTCTTCTACAGTCCCGTTACCCCCGATGGCTTCTTCCTCATCAGCGCAAGCAAAGATTCTAGTCCTATGTTAAGAAATGGAGAGACTGGGGATTGGATTGGAACATTTCAAGGCCACAAAGGTGCCGTTTGGAGTTGCTGCTTGGATACCAATGCCTTACGTGCTGCATCTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGATGCATTAACAGGGGATGAATTGCACTCCTTTGAGCATAAACACATTGTTCGAGCATGTGCTTTTTCTGAGGATACACACCTCTTGCTCACTGGAGGAGTAGAGAAAATTCTCCGTATCTATGATATGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCCCCTGGTTCTGTCAGAACTGTTGCATGGCTTCATAGTGACCAGACAATATTGAGTTCTTGCAGTGATATGGGAGGTGTCAGGTTATGGGATGTGAGGAGTGGCAAAATAGTCCAGACACTGGAGACCAAGTCTTCAGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATTACAACAGTTGATGGTTCAACTGTCAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGATATGCCTTCCACCATGGAATCAGCTTCATTGGAGCCAAAGTACGGGAACAAGTTCATTGCTGGGGGAGAAGACATGTGGGTTCATGTTTTCGATTTCCATACAGGCAATGAGATTGCTTGCAACAAGGGCCACCATGGTCCTGTCCATTGTGTTCGTTTCTCTCCTGGAGGAGAATCATATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGCCCATTGTCAAATGATGCATCGTTGGATGCCTTATCTGCAAATGAATCAATCGAAAAGGCGATGAAGGTAAGTGCAGATGAGGTTTCTAGCAAAATGGAGGGTTTTCATATTGCAGATGAGGGGAAATCCAAGGAGAAGGAAGAGGCTGGGGAGTAA | 1056 | 0.4612 | MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFQGHKGAVWSCCLDTNALRAASASADFSTKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCSDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSQDGRYITTVDGSTVKFWDANHYGLVKSYDMPSTMESASLEPKYGNKFIAGGEDMWVHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLSNDASLDALSANESIEKAMKVSADEVSSKMEGFHIADEGKSKEKEEAGE | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal7g1289 | 351 | MobiDBLite | consensus disorder prediction | 332 | 351 | - | - | |
Lal7g1289 | 351 | Gene3D | - | 9 | 324 | IPR015943 | GO:0005515 | |
Lal7g1289 | 351 | SMART | WD40_4 | 5 | 47 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | SMART | WD40_4 | 50 | 89 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | SMART | WD40_4 | 134 | 174 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | SMART | WD40_4 | 259 | 298 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | SMART | WD40_4 | 217 | 256 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | SMART | WD40_4 | 177 | 214 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | SMART | WD40_4 | 92 | 130 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 266 | 298 | - | - | |
Lal7g1289 | 351 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 347 | - | - | |
Lal7g1289 | 351 | MobiDBLite | consensus disorder prediction | 331 | 351 | - | - | |
Lal7g1289 | 351 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 266 | 298 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | CDD | WD40 | 14 | 298 | - | - | |
Lal7g1289 | 351 | PANTHER | OS02G0205400 PROTEIN | 1 | 347 | - | - | |
Lal7g1289 | 351 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 57 | 98 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | Pfam | WD domain, G-beta repeat | 179 | 214 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | Pfam | WD domain, G-beta repeat | 94 | 130 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | Pfam | WD domain, G-beta repeat | 265 | 297 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | Pfam | WD domain, G-beta repeat | 54 | 89 | IPR001680 | GO:0005515 | |
Lal7g1289 | 351 | SUPERFAMILY | WD40 repeat-like | 4 | 303 | IPR036322 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal7g1289 | Lal-Chr7 | 18260879 | 18266874 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal7g1289 | 9 | 296 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 27.607 | 6.84e-38 | 137 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal7g1289 | K13137 | - | gmx:100782712 | 647.506 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal7g1289 | 7 | 18260879 | 18266874 | Lal7g1289 | 7 | 18260879 | 18266874 | ECH | |
Lal7g1289 | 7 | 18260879 | 18266874 | Lal19g1405 | 19 | 16765393 | 16771365 | LSH |