Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1287 ATGAAAGGGGAAGTGCAGCTTCAGCCACCACAGGTTGTGCAAAACCCTAGTAGAGATTCCGATCCTCTACTCGAAAATCAAGAGGAGGAGGAGGAGGAGCGTGAATCCCCTGCAGCAACCCCCACTGAGATTAATGATGAAGACGAGGACGTTGAGGCTGGTCTACTCCCTTCTTGTCGAATTTGCCTCGAAAGCGATTCCGACCCAGAGGATGAATTGATATCCCCATGCATGTGCAAAGGTACTCAGCAATTTGTCCATCGTTCATGTCTTGATCACTGGCGCTCAGTGAAAGAAGGATTTGCCTTCTCACACTGCACCACTTGCAAAGCCCAATTTCATCTTAGAGTTGAATCGTTTGAGGATAACTCATGGCGGAAAGTAAAGTTCAGACTTTTTGTTGCAAGGGATGTTTTCCTTGTTTTTGTGGCTGTACAAACTGTGATTGCTGCTATAGGTGGCTTTGCATACATCATGGACAAAGATGGGAACTTCAGGAACTCTTTTGACGATGGTTGGGATAGGATACTGTCAAGACACCCTATTCCATTTTATTACTGTATTGGAGTGCTGTCATTCTTTGTACTGATTGGATTTTTTGGTCTTATACTGCATTGTTCCTCCCTCAATAACAATGACCCCAGAATGGCTGGTTGTCAGAATTGTTGTTATGGATGGGGCATCTTGGACTGCTTTCCGGCATCAATGGAGGCATGCTTTGCCCTTGTGGTTGTTTTCGTTGTCATCTTTGCAATTCTCGGTATAGCATATGGTTTCCTCGCTACCACCATGGCCATTCAAAGAATCTGGCAGAGGCACTACCATATCCTCACCAAGCGGGAGCTTACAAAGGAATACATAGTAGAGGATCTTGGTGGCAGTTATTCCCCACCAAAGTTGGACCCAGAACATGAAGCTCGCTTGAAAATGCTTAACCTTTTGTGA 945 0.4529 MKGEVQLQPPQVVQNPSRDSDPLLENQEEEEEERESPAATPTEINDEDEDVEAGLLPSCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESFEDNSWRKVKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDKDGNFRNSFDDGWDRILSRHPIPFYYCIGVLSFFVLIGFFGLILHCSSLNNNDPRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYGFLATTMAIQRIWQRHYHILTKRELTKEYIVEDLGGSYSPPKLDPEHEARLKMLNLL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1287 314 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 313 - -
Lal7g1287 314 SMART ringv_2 58 110 IPR011016 GO:0008270
Lal7g1287 314 CDD RING_CH-C4HC3_MARCH 59 110 - -
Lal7g1287 314 SUPERFAMILY RING/U-box 57 114 - -
Lal7g1287 314 ProSiteProfiles Zinc finger RING-CH-type profile. 51 116 IPR011016 GO:0008270
Lal7g1287 314 MobiDBLite consensus disorder prediction 1 49 - -
Lal7g1287 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 122 IPR013083 -
Lal7g1287 314 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 313 - -
Lal7g1287 314 Pfam RING-variant domain 59 109 IPR011016 GO:0008270
Lal7g1287 314 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1287 Lal-Chr7 18253305 18256602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1287 1 314 C3H Transcription Factor Family AT1G11020 77.329 3.76e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1287 - - lang:109345289 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1287 7 18253305 18256602 Lal7g1287 7 18253305 18256602 ECH