Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1213 ATGTTGAGTTTGAAGGGAGGTAGCAGGCCACCATGGGTGGGACTTGGAGCTTCAGTGTGGGTTCAAATAGCTGCAGGGAATTGTTATACATTCCCACTTTACTCTCACTCTTTGAAATCTGTTCTTGGTTTCAGCCAGAGCCAACTCACACTTCTTGGTGTTGCTAATGATTTAGGTGAAAATGTTGGTCTTCTTCCTGGTCTTGCTTCTAACACTTTCCCTCCTTGGCTCATCCTTTTCATTGGTGCTATCTTCTCTTTCTTTGGCTTTGGTCTTCTTTACCTCTCTATCACTATCACCCTTCACTCCATTCCTTATTGGTTGTTATGTTTGGCTTTGGCAGTTGCCACCAACAGTTGTGCATGGTTAACCACTGCTGTTCTTGTAACCAACATGAGAAATTTCCCTGTTAGTAGAGGCACAGTTGCAGGAATCCTCAAAGCTTATGGTGGCCTCAGTACTGCAGTTTATACTCAAATTTACAAAGTAGTTCTTCACAATTCATCTTCCGAATTCCTATTGTTCCTTGCTGTTGGTATTTCTATCTCGTGCTTCAGTACGATGTTTCTTGTTAGGCCTTGTACTCCAGCTTCTGGTGAAGATTCTGCAGAAAAATGGCATTTTCTTTTTATCCAAGTTTCTAGTGTGGTCTTAGGTTTATACACACTTGCAACAAATATATTTGCTGATTTTCTTCCCATTAGTGGTATCACTGCTTCTTATATTTTGGTAACTGTAATGATTCTCCTTCTCATAGCTCCATTTGCTATCCCTATAAAGATGACATTGTGTACTAGAAAAGCCACCAGACTAGAAACACCTAAGCTACAAGTTGGTTCTTCAGAATCAGATTCTCCGATTCAAGAATGCAAAGAAGATCACACACAGCCCCTCCTATCTTCTTCATCATCTAATGTCCTTGAAGGTTATTATAAGAATGATGGTTCATCTGAGGTGGCTATGCTTCTTGCTATGGGAGAGGGGGCAATAAAGAAGAGAAGGCCTAAAAGAGGGGAAGATTTTAAGTTCACCGAGGCTCTAATAAAAGCTGATTTCTGGTTACTTTTCTTTGTCTACTTTGTTGGTGTTGGAACTGGGGTCACTGTTATTAATAATCTGGCTCAAATTGGCATTGCACAAGGTGTGGAAGATACCACTACCTTGTTATCACTATTCGGCTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTCTCGGAACATTTTGTAAGCACTAAAACGTTGCCAAGGATAGTTTGGATGACATGCGCTCAGACAATTATGATCATATTGTACTTACTGTTTCCATATGCTATCAAGGGAACACTGTACCCTGCAATTGCATTTCTCGGTATCTGCTTCGGCGTGCAATTTTCCATAGTGATTCCAACTGTTTCAGAGCTTTTTGGTTTGAAGGACTTTGGCTTAATGTACAGTGTCTTGGCTTTGGGAAATCCACTAGGAGCATTCCTTTTCTCAGCAATTCTAGCAGGGCATGTATATGATAATGAGGCAGCAAAGCAACATGGTCTAGGACTCATTGCTTCAAGTGTTTCATGTGTGGGTCCTAATTGCTTTAAGCTTACTTTCTTTATTCTGGCTGGTGCCTCTGCTATGGGTACCATCATGAGCATTATCTTGAGTCTGAGAATTAAACCAGTTTACCAAATGCTTTATACTGGTGGTTCCTTTAGGCTACCTCAAAAAACAGGTCCCTAA 1722 0.41 MLSLKGGSRPPWVGLGASVWVQIAAGNCYTFPLYSHSLKSVLGFSQSQLTLLGVANDLGENVGLLPGLASNTFPPWLILFIGAIFSFFGFGLLYLSITITLHSIPYWLLCLALAVATNSCAWLTTAVLVTNMRNFPVSRGTVAGILKAYGGLSTAVYTQIYKVVLHNSSSEFLLFLAVGISISCFSTMFLVRPCTPASGEDSAEKWHFLFIQVSSVVLGLYTLATNIFADFLPISGITASYILVTVMILLLIAPFAIPIKMTLCTRKATRLETPKLQVGSSESDSPIQECKEDHTQPLLSSSSSNVLEGYYKNDGSSEVAMLLAMGEGAIKKRRPKRGEDFKFTEALIKADFWLLFFVYFVGVGTGVTVINNLAQIGIAQGVEDTTTLLSLFGFFNFVGRLGGGVVSEHFVSTKTLPRIVWMTCAQTIMIILYLLFPYAIKGTLYPAIAFLGICFGVQFSIVIPTVSELFGLKDFGLMYSVLALGNPLGAFLFSAILAGHVYDNEAAKQHGLGLIASSVSCVGPNCFKLTFFILAGASAMGTIMSIILSLRIKPVYQMLYTGGSFRLPQKTGP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1213 573 SUPERFAMILY MFS general substrate transporter 21 554 IPR036259 -
Lal7g1213 573 Gene3D MFS general substrate transporter like domains 348 555 IPR036259 -
Lal7g1213 573 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 571 - -
Lal7g1213 573 Pfam Nodulin-like 11 259 IPR010658 -
Lal7g1213 573 CDD MFS_Mch1p_like 10 542 - -
Lal7g1213 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 571 - -
Lal7g1213 573 MobiDBLite consensus disorder prediction 275 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1213 Lal-Chr7 17800661 17803311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1213 2 572 Nodulin-like Gene Family AT1G80530 53.833 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1213 - - gmx:100787328 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1213 7 17800661 17803311 Lal7g1213 7 17800661 17803311 ECH
Lal14g1800 14 17750902 17753927 Lal7g1213 7 17800661 17803311 LSH
Lal7g1213 7 17800661 17803311 Lal17g1387 17 15304904 15310564 PCT
Lal17g1387 17 15304904 15310564 Lal7g1213 7 17800661 17803311 PCT