Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1207 ATGTGTGTGCAGGAAAACGGGGAGCAAGTTGCTCAAAATACTGAGACCATTGATGACAGAAGGGCTTCATGGCCTTTGCATTGTGATATCTTGCATACCCACATGGACAATTGGGAAAAAGCCTCTACCTTTACAACTTCCATAGCAAATTCACTTCCTCTTGAAAGCATATGTGAGAATTCAGAAATTGCTGACAAAAAACAGAACCTGATGAGTTTTGTCCCGGTTCTTCGGTCTGGAGAGTGGTCTGATATTGGAGGTCGACCTTACATGGAGGATACCCATGTAAGCATTGGAGACTTGGCGAAGAAATTTGGTTATAACATGCTTTGTGAGGAAACTGTTTCTTTATATGGTGTATTCGATGGCCATGGGGGGCAAAGTGCTGCACAATTCGTCCGTGATCACTTGCCGAAGGTGATTGTTGAGGATGCTGACTTTCCTTTCGAACTTAAGAAGGTAGTCACAAGGTCATATTTAGAGACTGATGCGGAGTTTGCAAAAACATGCTCTATTGAGTCTTCCCTATCTTCTGGTACAACTGCACTCACTGCAATTATATTTGGAAGGTCTCTACTTGTAGCGAATGCTGGAGATTGCCGAGCTGTTTTGTGCCGAAGTGGAAAGGCTATAGAAATGTCCAAAGATCATAGTCCCTTCTGCATTAAAGAAAGACAGCGGATTGAGTCCCTAGGTGGATTCGTGGATGACGGTTACCTGAATGGACTATTAGGCGTTACTCGTGCTTTAGGTAACTGGCATCTTGAAGGAATGAAAGAAAATAGTGGAAGAGATGGACCATTGATTGCCGAACCTGAAATTAAAATGGCAACATTGACCAAAGAAGACGAGTTATTGATAATTGGCAGCGACGGAATCTGGGATGTTTTTCGTAGCCAAAATGCCGTAGATTTTGCAAGAAGGAGGCTTCAAGAGCACAATGATGTGAAACAATGTTGCAAGGAAATAGTAGAGGAAGCAATAAAAAGAGGAGCAACAGATAACTTGACAGTTGTTATTGTATCTTTTCACTCCGATCCACCGCCTCCTGTTGTTGTAGAAAGGCTAAGAGTCAGGAGAAGCATATCAGCTGAGGGACTTCAGAATCTTAAATGCTTGTTAGAAGGATAA 1131 0.4253 MCVQENGEQVAQNTETIDDRRASWPLHCDILHTHMDNWEKASTFTTSIANSLPLESICENSEIADKKQNLMSFVPVLRSGEWSDIGGRPYMEDTHVSIGDLAKKFGYNMLCEETVSLYGVFDGHGGQSAAQFVRDHLPKVIVEDADFPFELKKVVTRSYLETDAEFAKTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAVLCRSGKAIEMSKDHSPFCIKERQRIESLGGFVDDGYLNGLLGVTRALGNWHLEGMKENSGRDGPLIAEPEIKMATLTKEDELLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEIVEEAIKRGATDNLTVVIVSFHSDPPPPVVVERLRVRRSISAEGLQNLKCLLEG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1207 376 ProSitePatterns PPM-type phosphatase domain signature. 117 125 IPR000222 GO:0043169
Lal7g1207 376 SUPERFAMILY PP2C-like 68 344 IPR036457 -
Lal7g1207 376 Pfam Protein phosphatase 2C 90 335 IPR001932 -
Lal7g1207 376 ProSiteProfiles PPM-type phosphatase domain profile. 78 343 IPR001932 -
Lal7g1207 376 CDD PP2Cc 78 343 IPR001932 -
Lal7g1207 376 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 364 - -
Lal7g1207 376 SMART PP2C_4 68 341 IPR001932 -
Lal7g1207 376 PANTHER PROTEIN PHOSPHATASE 2C 1 364 IPR015655 GO:0004722|GO:0006470
Lal7g1207 376 Gene3D - 54 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1207 Lal-Chr7 17752670 17756472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1207 67 376 PP2C-type Phosphatase Gene Family AT2G25620 58.974 1.08e-130 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lal7g1207 PP2C 1.3e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1207 K14803 - gmx:100782648 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1207 7 17752670 17756472 Lal7g1207 7 17752670 17756472 ECH
Lal14g1795 14 17700442 17705079 Lal7g1207 7 17752670 17756472 LSH