Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1200 ATGGCATCTGACATTTCATTTGAGGAACTCAAAAATGAGAATGTGGATCTTGAAAACATTCCCATTGAGGAAGTTTTCAAGCAGCTAAAATGTAGCAAGGAGGGTCTAACCACAGCTGAAGGGGAAAACAGGCTTCAAGTATTTGGTCCAAACAAGCTTGAAGAGAAAACAGAGAACAAGTTCCTTAAATTTTTGGGTTTTATGTGGAATCCTTTATCATGGGTTATGGAAGCCGCTGCTATAATGGCCATTGCTTTGGCCAATGGAGGGGGAAAGCCACCGGATTGGCAAGATTTCGTTGGTATTGTGGTGTTGCTTATCATCAACTCAACCATTAGTTTCATTGAGGAAAACAATGCAGGCAATGCCGCAGCGGCATTGATGGCTGGTCTTGCACCAAAAACCAAGGCTATTGTTATCGCTACTGGTGTCCACACCTTCTTTGGAAAGGCTGCACATCTTGTTGATAGCACCAACAATGTTGGTCACTTCCAAAAGATTATTGAACTATGTGGTCTCAATGGAGAGGTTTTGAAAAGGGCCCATGGAATCATTGATCAGTTCGCTGAGCGCGGTCTTCGCTCATTGGGTGTTGCACATCAGACCGTTTTAGAAAAGACCAAGGAAAGTGCAGGAGACTCGTGGGAGTTCTTGGGCCTCTTGCCCCTCTTTGACCCTCCAAGACATGATAGTGCAGAGACTATTCGTCGTGCTCTTGACCTTGGAGTCAATGTTAAGATGATCACTGGTGATCAACTTGCAATCGGAAAAGAAACCGGTCGCAGGCTTGGAATGGGAACCAACATGTATCCTTCATCCACCCTTCTTGGTGAGAACAAGGATTCATCCCTTGCAACAATCCCAATTGATGAGCTCATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCCTGAACACAAGTATGAAATTGTCAAGAGATTGCAAGATAGGAAGCACATTGTTGGAATGACTGGAGATGGTGTGAATGATGCACCAGCACTAAAGAAAGCAGATATTGGCATTGCAGTGGATGATGCAACTGACGCAGCCAGAAGTGCCTCAGACATTGTTTTGACAGAACCAGGACTTAGTGTGATTGTGAGTGCCGTCTTGACCAGCAGGGCCATCTTCCAGAGGATGAAAAACTACACAATATATGCTGTTTCCATCACCATTCGTATCGTATTCGGGTTCATGCTTGTGGCTCTGATATGGAAGTTTGACTTCTCACCATTCATGGTCCTGATCATTGCCATCTTGAACGATGGAACCATTATGACCATCTCTAAAGATAGGGTGAAGCCTTCTCCTCTGCCCGACTCATGGAAGCTTAAGGAAATCTTTGCCACTGGAGTTGTTCTTGGATCTTACATGGCTATCATCACAGTGGTCTTCTTCTATTTAGTTCATGACACTGACATCTTCACCAGAGTTTTTGGTGTCAAGCCAATTGCAGACAGTGAGGAGATGCTTAACTCAGCTCTCTACCTTCAAGTTAGTATTATTAGTCAGGCACTCATATTTGTAACCAGATCAAGGAGTTGGTCTTATGTTGAACGTCCTGGCTTCTTGCTAATGGCAGCCTTCCTTGCTGCACAATTGGTTGCCACTGTGATTGCTGTGTATGCACACTGGGACTTTGCTAGAATCCATGGATTTGGTTGGAGATGGGCAGGAGTAATTTGGATCTTCAGCATTGTGACATACATTCCTCTTGACATTCTCAAGTTCCTCATCCGCTTAGGATTGTCTGGCAAGGCCTGGGACAACATGCTAGAAAACAAGACTGCATTCACAACAAAGAAGGACTATGGAAAAGGACAAAGAGAGGCTCAATGGGCAGTTGCTCAACGCACACTCCATGGTCTACATGTTCCTGAATCCCATAAGAACAATAATTATGAGCAATCTGAAATTGCTGAGCAGGCTAAGAGGCGTGCTGAGGCTGCTAGGCTTAGAGAACTCCACACACTCAAGGGACATGTTGAATCTGTGGTGAAGTTGAAGGGTCTTGATATTGATACCATCCAACAACACTATACACTTTAA 2049 0.4446 MASDISFEELKNENVDLENIPIEEVFKQLKCSKEGLTTAEGENRLQVFGPNKLEEKTENKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKAIVIATGVHTFFGKAAHLVDSTNNVGHFQKIIELCGLNGEVLKRAHGIIDQFAERGLRSLGVAHQTVLEKTKESAGDSWEFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSTLLGENKDSSLATIPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGSYMAIITVVFFYLVHDTDIFTRVFGVKPIADSEEMLNSALYLQVSIISQALIFVTRSRSWSYVERPGFLLMAAFLAAQLVATVIAVYAHWDFARIHGFGWRWAGVIWIFSIVTYIPLDILKFLIRLGLSGKAWDNMLENKTAFTTKKDYGKGQREAQWAVAQRTLHGLHVPESHKNNNYEQSEIAEQAKRRAEAARLRELHTLKGHVESVVKLKGLDIDTIQQHYTL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1200 682 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Lal7g1200 682 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 164 227 IPR023299 GO:0000166
Lal7g1200 682 Pfam haloacid dehalogenase-like hydrolase 151 338 - -
Lal7g1200 682 Gene3D - 329 581 - -
Lal7g1200 682 Gene3D - 67 173 - -
Lal7g1200 682 Gene3D - 632 682 - -
Lal7g1200 682 SUPERFAMILY HAD-like 216 370 IPR036412 -
Lal7g1200 682 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 299 410 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1200 682 PANTHER CALCIUM-TRANSPORTING ATPASE 137 167 - -
Lal7g1200 682 PANTHER CALCIUM-TRANSPORTING ATPASE 166 662 - -
Lal7g1200 682 PANTHER CALCIUM-TRANSPORTING ATPASE 4 137 - -
Lal7g1200 682 PRINTS P-type cation-transporting ATPase superfamily signature 219 230 - -
Lal7g1200 682 PRINTS P-type cation-transporting ATPase superfamily signature 241 251 - -
Lal7g1200 682 PRINTS P-type cation-transporting ATPase superfamily signature 324 343 - -
Lal7g1200 682 PRINTS P-type cation-transporting ATPase superfamily signature 347 359 - -
Lal7g1200 682 PRINTS H+-transporting ATPase (proton pump) signature 181 199 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1200 682 PRINTS H+-transporting ATPase (proton pump) signature 296 312 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1200 682 PRINTS H+-transporting ATPase (proton pump) signature 324 340 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1200 682 PRINTS H+-transporting ATPase (proton pump) signature 355 380 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1200 682 PRINTS H+-transporting ATPase (proton pump) signature 496 517 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1200 682 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 581 IPR023298 -
Lal7g1200 682 PANTHER PLASMA MEMBRANE ATPASE 4 137 - -
Lal7g1200 682 PANTHER PLASMA MEMBRANE ATPASE 166 662 - -
Lal7g1200 682 PANTHER PLASMA MEMBRANE ATPASE 137 167 - -
Lal7g1200 682 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1200 Lal-Chr7 17710873 17715271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1200 162 682 Primary Pumps ATPases AT3G42640 82.567 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1200 K01535 - gmx:100798717 908.672