Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1185 ATGGCATTGGCTGGGACTGGAGTGTTTTCAGAGACTTTTGATGGAGATGTGTATAAGTACTATGCTGATGGAGAATGGAAGAAATCTTCTTCTAACAAAAGTGTTGCTATAATCAACCCCACTACTAGAAAAACTGAATACAAAGTTCAAGCTTGTTCACAAGAGGAGGTTAATAAGGTAATGGATTCAGCAAAATCTGCACAAAAGTTATGGGCAAAGACCCCACTATGGAAAAGGGCTGAACTTCTTCACAAGGTAGCTGCTATTCTCAAAGAGAACAAAGCTCCAATTGCTGAGTGCTTAGTTAAGGAAATAGCAAAGCCAGCCAAAGATGCTGTAACAGAGGTTGTAAGATCTGGGGATCTGATTTCTTACTGTGCTGAAGAAGGTGTGAGGATTTTGGGAGAGGGAAAGTTCTTAGTATCTGATAGTTTTCCAGGAAATGAAAGGACAAAGTATTGCCTCACATCCAAGATTCCATTAGGAGTGATTTTAGCCATTCCACCTTTTAATTATCCTGTGAATCTTGCTGTCTCAAAAATTGCCCCTGCACTGATTGCTGGAAATTCCATTGTGCTCAAGCCTCCAACTCAGGGTGCTGTTTCTGCTTTGCACATGGTTCATTGCTTTCACTTAGCTGGTTTTCCCAAAGGCTTAATCAATTGTGTCACTGGCAAAGGCTCAGAGATTGGTGACTTCCTTACACTGCATCCAGGAGTGAATTGTATAAGCTTCACTGGTGGAGATACTGGCATTGCAATTTCAAAGAAGGCAGGTATGATTCCTCTTCAAATGGAGTTGGGAGGAAAAGATGCATGCATTGTACTTGAAGATGCTGACCTTGATTTGGTGGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGTGGTCAGAGGTGCACTGCAGTTAAAGTTATCCTGGTAATGGAATCTGTGGCTGATGCTTTGGTTGAGAAAGTGAAGGCTAAGGTGGCAAAGCTAAGTGTTGGACCACCAGAGAATGACAGTGATATAACACCGGTTGTGTCAGAATCATCGGCGAATTTCATCGAAGGTCTAGTCTTGGATGCTAAACAGAAAGGTGCAACATTCTGCCAGGAGTACAAAAGAGAAGGTAATCTCATTTGGCCATTGCTATTGGATAATGTTAGGCCTGACATGAGAATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCAGTAATTAGGATCAATTCTGTTGAAGAAGGAATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTCTTCACAAAGGATATCAACAAGGCAATGTTGATCAGTGATGCAATGGAGACAGGAACAGTTCAGATAAATTCTGCCCCAGCTCGTGGACCAGACCATTTTCCCTTTCAGGGTATAAGGGACAGTGGAATTGGATCTCAAGGGATTACCAACAGCATAAACATGATGACCAAGGTCAAAACAACTGTGATAAACTTACCTAGCCCTTCTTATACAATGGGCTAG 1497 0.4208 MALAGTGVFSETFDGDVYKYYADGEWKKSSSNKSVAIINPTTRKTEYKVQACSQEEVNKVMDSAKSAQKLWAKTPLWKRAELLHKVAAILKENKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLINCVTGKGSEIGDFLTLHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVILVMESVADALVEKVKAKVAKLSVGPPENDSDITPVVSESSANFIEGLVLDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGIRDSGIGSQGITNSINMMTKVKTTVINLPSPSYTMG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1185 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 485 IPR016162 GO:0016491
Lal7g1185 498 SUPERFAMILY ALDH-like 17 489 IPR016161 GO:0016491
Lal7g1185 498 CDD ALDH_F11_NP-GAPDH 17 489 - -
Lal7g1185 498 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Lal7g1185 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 459 IPR016163 GO:0016620
Lal7g1185 498 Pfam Aldehyde dehydrogenase family 26 485 IPR015590 GO:0016491
Lal7g1185 498 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Lal7g1185 498 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 3 498 - -
Lal7g1185 498 PANTHER ALDEHYDE DEHYDROGENASE 3 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1185 Lal-Chr7 17600532 17603989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1185 3 498 Aldehyde Dehydrogenase Gene Family AT2G24270 89.718 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1185 K00131 - gmx:100789100 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1774 14 17588513 17591514 Lal7g1185 7 17600532 17603989 LSH