Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1182 ATGCAATTTTCTGATTTCTATTCTATTGCGTGTGATAAGGTTCTTGTGTGCTTCTTCGCTAACATGGCTATGCTTCGCAAATTGTTCTTTCGCAAGCCTCCTGATGATCTCATAGAAATTTGTGACAGAGTCTATCTTTTTGATTGCTGCTTCATCACGGAAGCATGGAATGAAGAGAAATACAAAGTGTACATGGATGGAATAGTAGGCCAGCTTCGAGAGAATTTGACTGATGCTTCCATTTTGGTATTCAATTTTCGCGAGGAAAATAGTAAGAGTCAATTAGCAAACATCATGTCTGATTATGACATTACCATCATGGACTATCCTCGACACTACGAGGGTTGCCCCATTCTCAAAATGGAGTTAATTCACCACTTCTTAAGGTCTGGTGAAAGCTGGCTCTCACTTGGTGACCACAATGTGTTGTTGATGCATTGTGAACGTGGTGGTTGGCCCGTTTTGGCTTTCATGCTTGCTGCATTGTTGATTTATAGAAAGGTTTGTACTGGGGAGCATAGAGCTTTGGATATGGTTTACAGGCAGGCGCCACACGAGCTTTTGCATCTTCTGACGCCGATGAATCCTGTCCCTTCCCAATTGAGGTATCTGCAGTATGTTTCCAGGAGGAATGTGACCTTGGATTGGCCTCCATTGGATAGGGCACTCTTGTTGGACTGCATCATTCTTAGATTTATTCCAAACTTTGATGCGCAAGGTGATTGTCATCCAGTGCTTAGAATTTATGGCCAGGATCCTTTAAGTGCAGATAAAAAAACAAAAATGCTGTACTCAACGCCAAAGAGAACCAGAAATGTCAGAGCTTACGAGCAGCATGTAGCAGATGCTGATCAAATTTCAACGTGGCTTCCGGGCCATACAAGGATGGATCTAGATGAGCTAAGGAGGGGGCCAATGCTCTTATATTTTGATAAATATGCTGAAACATTTGCAGTTCTAGGAGAGTGTAAACTAATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTCGTGATAGAGAGCATTAACTTGAGTGGCGACATGGAGCGTGAAATAATGATGTTCCGTGTCATGTTCAATACAGCTTTTGTTAGATCTAATATACTAATGCTTAACCGGGATGAAGTCGACATTTTATGGGACACTGAATATCACTTTCCAAAGGATTTCAGAGCCGAGATCCTTTTCTCAGAGTTAGATGCTGCTGCAGCAGTTACTGCAGATGGCACTTCATGGTTTGAGGAGAAAGAGGGACTGCCAGTGGAAGCCTTTGCCAAGGTTCAAGAGATTTTTAGCCACGTCGACTGGTTGAGTCCGAAGGCAGATGCTGCACTTAATCTACTTGAACAGCTAAGTAATGCAGTTATCATGAACGACAAGTTGGATAGAGTTTCTGATCAATCTTTGTCTTCGTCTAAGCAATCTACAGATAAATATATAATGAGTAGAAAAGAGGATAAGACCAACAAGGTTGATGCTACTCCACAACAGCCTAGTACTTCTGACATGGTCTGTCAAGAAACGCCGAGTGCTTCTGGAAGAACCTCTGCTTCTAGTAAATGTCTGACAGGTTCTACAAATATTGACATAAAACCGCAGGCATGTGATACTACTTTATCTGGTTCTGTGGATACTGCTCTTTCCCCAGAAACACCTCCACTGCAGCCTCCCTCAACTACTTGTGCTAAAGATTTTGATGATTCTCCTCCGCACATGGAATCACTACCTCATCATCTTTTTCCCTCGAAAACAAGACAACATCCTGTTACCGAGGAAGCTAAAGCTCAGCCACATGACAGAAGTCAGTCGTCTATTTCGAGCTCAATATCTGCGATGGAAGACTCATCTAACTGTCATAGTAAGTTACCAGCTGATGTTAGTTCTCATTCCTCAGAAATTACTTCAATCCAAAGAACCCGTTCACTTTCTCCCAAAACACCGGCGAAAGAGATTCTGCCTGTTAGAACAAGACCTGAGCCATCTCCTTCACAACCTCCAACTCCACCTCCTCCTCCTACTCCACTAAAGGATCATAAACCAGTTAGAGCTGGACCCCCTCCTCCCCTAAAAGTAAAGCAACCTATAGCATTTAAGCCTTCTCCACCTCCACCTCCACCACCTCCTCTTCTTTCGGGGAAAGCTTCAGGTGTTGCTCTAGCACAGCCACCTGCAGCACCGGCTGCTCCACCACCTCCTGTACCCTTTGGTAAAAGAGGTCTAAAATCAGGCAGTGCTTGTCCGGGCTCTATTTCTGTGGGCGGTAATGGAAATAATGAGTCAGCTACAACAGGACCTCAATCTAGTTTGTCGAAAGGCTCTAAAGGACGAATTCTATCACGTACGGTAAGTTCAAAGAACAACACCAAAAAGTTGAAGCCATTGCATTGGCAAAAACTATCAAGACCAGTGCAAGGAAGTTTATGGGATGAGACGCAAAAATCTAGCGAAGCTCCCAATGCCCCAGAGATTGACATGTCGGAACTTGAGAATCTCTTCTCAGCAGCAGTCCCAAGCTCAGACCCTGCAAAGAAGTCAAATGTCCAAAGCTCAGTTGGACATAAATATGAAAAAGTGCAACTGATTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTACATGATTTAATGAGCTCAGTACTAGCATTGGAACAGTCAGCACTAGACACTGATCAAGTTGAAAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGAAAGTACTCAAGGGTTATACAGGGGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTCCTCGAGTTGATGCAAATACCGCGTGTAGAAACCAAGCTCAGAGTTTTTTCATTCAAGATTCAGTTCAATTCTCAGGTTTCTTACCTTAGAAATAGCCTGAATGTGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTCTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCTATTGGATTTAGATTGGATAGTCTTCTTAAACTCACAGAGACACGTGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTGGCTGACCAACTACCAGAAGTTTTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCGGCAGCAAAGATCCAAATAAAGTTTCTGGCAGAAGAGATGCAAGCTAATTTGAAAGGGTTCCTCTCTTCTGCTGAAGCCGAAGTGCGTTCATTGGCTTCATTATATTCTGGCGTGGGTAGGAATGTAGATGCGTTGATTCTTTACTTCGGTGAAGATCCCTTTCGCTGCACTTTTGAGCAAGTTGTCACAACTTTGCTCAACTTCACTAGAATGTTCAACAAAGCCCATGAAGAAAACCGCAAGCAGGTAGAGCTTGAAATGAAGAAAACAGAAGACAGTGAGAAAAAGAAATGTGAATCTGAAAGGATATTACCTACAGTGGTCTGCACTGGCAATGTCAAATGA 3492 0.4261 MQFSDFYSIACDKVLVCFFANMAMLRKLFFRKPPDDLIEICDRVYLFDCCFITEAWNEEKYKVYMDGIVGQLRENLTDASILVFNFREENSKSQLANIMSDYDITIMDYPRHYEGCPILKMELIHHFLRSGESWLSLGDHNVLLMHCERGGWPVLAFMLAALLIYRKVCTGEHRALDMVYRQAPHELLHLLTPMNPVPSQLRYLQYVSRRNVTLDWPPLDRALLLDCIILRFIPNFDAQGDCHPVLRIYGQDPLSADKKTKMLYSTPKRTRNVRAYEQHVADADQISTWLPGHTRMDLDELRRGPMLLYFDKYAETFAVLGECKLIKIDINCHIQGDVVIESINLSGDMEREIMMFRVMFNTAFVRSNILMLNRDEVDILWDTEYHFPKDFRAEILFSELDAAAAVTADGTSWFEEKEGLPVEAFAKVQEIFSHVDWLSPKADAALNLLEQLSNAVIMNDKLDRVSDQSLSSSKQSTDKYIMSRKEDKTNKVDATPQQPSTSDMVCQETPSASGRTSASSKCLTGSTNIDIKPQACDTTLSGSVDTALSPETPPLQPPSTTCAKDFDDSPPHMESLPHHLFPSKTRQHPVTEEAKAQPHDRSQSSISSSISAMEDSSNCHSKLPADVSSHSSEITSIQRTRSLSPKTPAKEILPVRTRPEPSPSQPPTPPPPPTPLKDHKPVRAGPPPPLKVKQPIAFKPSPPPPPPPPLLSGKASGVALAQPPAAPAAPPPPVPFGKRGLKSGSACPGSISVGGNGNNESATTGPQSSLSKGSKGRILSRTVSSKNNTKKLKPLHWQKLSRPVQGSLWDETQKSSEAPNAPEIDMSELENLFSAAVPSSDPAKKSNVQSSVGHKYEKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEQSALDTDQVENLIKFCPTKEEMKVLKGYTGEKEKLGRCEQFFLELMQIPRVETKLRVFSFKIQFNSQVSYLRNSLNVIRNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADQLPEVLDFSKDLANLEPAAKIQIKFLAEEMQANLKGFLSSAEAEVRSLASLYSGVGRNVDALILYFGEDPFRCTFEQVVTTLLNFTRMFNKAHEENRKQVELEMKKTEDSEKKKCESERILPTVVCTGNVK 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1182 1163 MobiDBLite consensus disorder prediction 493 523 - -
Lal7g1182 1163 Pfam C2 domain of PTEN tumour-suppressor protein 221 399 IPR014020 -
Lal7g1182 1163 Gene3D - 222 401 - -
Lal7g1182 1163 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 322 400 IPR035892 -
Lal7g1182 1163 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 33 208 IPR029021 -
Lal7g1182 1163 SMART PTEN_C2_2 218 399 IPR014020 -
Lal7g1182 1163 MobiDBLite consensus disorder prediction 659 712 - -
Lal7g1182 1163 MobiDBLite consensus disorder prediction 542 797 - -
Lal7g1182 1163 MobiDBLite consensus disorder prediction 467 523 - -
Lal7g1182 1163 MobiDBLite consensus disorder prediction 749 791 - -
Lal7g1182 1163 Coils Coil 1122 1142 - -
Lal7g1182 1163 Pfam Formin Homology 2 Domain 786 1064 IPR015425 -
Lal7g1182 1163 SMART it6_source 782 1158 IPR015425 -
Lal7g1182 1163 MobiDBLite consensus disorder prediction 600 645 - -
Lal7g1182 1163 PANTHER FORMIN-J 22 1146 - -
Lal7g1182 1163 MobiDBLite consensus disorder prediction 567 599 - -
Lal7g1182 1163 ProSiteProfiles C2 tensin-type domain profile. 220 400 IPR014020 -
Lal7g1182 1163 ProSiteProfiles Formin homology-2 (FH2) domain profile. 782 1147 IPR015425 -
Lal7g1182 1163 Gene3D Formin, FH2 domain 780 1132 IPR042201 -
Lal7g1182 1163 SUPERFAMILY Formin homology 2 domain (FH2 domain) 702 1139 - -
Lal7g1182 1163 Gene3D Protein tyrosine phosphatase superfamily 32 221 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1182 Lal-Chr7 17577093 17584470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1182 22 463 Protein tyrosine phosphatase (PTP) family AT5G58160 56.885 9.57e-178 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1182 - - lang:109346359 1848.56