Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1179 ATGGGTTTGGGAGTATTTGGTTCTTTTCTTGCTTTGACACTCTTGTTCAAGCATTTGGCTTCACAGCAACCAAACACTGATGAGTTTTTTGTGTCTGAGTTTTTGAACAACATGGGTTTCTACAACTTCACTGCTTCTGTTTGTTCATGGGAAAGGGTTTCTTGTGATGCAAATAGAGAACATGTTTTTGAGTTAAACTTTTCTGGTATGGGCCTAACTGGTCCTATTCCTGATACCACCATAGGCAAGCTTAGCAAGCTTCAATCTTTGGATCTTAGCTTCAACAAAATCACTGCTTTGCCTTCAGATTTCTGGGGTTTGAGCTCTCTCAAGACACTTAACCTCTCTTCCAATCAGATTTCTGATTCATTTAACAACATTGGCAACTTTGCTTTGCTAGAAACCTTTGACTTGTCCAGCAACAATTATTCTGATGAAATTCCTGAAGCTATCAGATCCCTTGTGAAACTGAGGGTCCTCAAACTTGACCACAACAGGTTTTCGCAGAGAATTACTTCAGGGATTCTCAAGTGCAAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTTAATGGAACACTTCCAGATGGTTTTGGTGCTGCTTTTCCTAAGCTGAGGACATTGAACCTTGCTGGGAATAATATCTATGGCCGTGTTTCGGATATTTTAGAGTTAAGGTCCATTGTGACTCTCAATATGTCAGCCAATTTGTTTGAAGGTTCTGTCATTGATGTGTTTCATGAACATCTGGAGGTCTTGGACCTTAGCAGAAACCGATTTCAAGGCCACATTCCTCAGGTACAGTACAACTCTAATTACAGTTGGTCTCATTTAGTTTATCTGGACTTGTCAGAGAATGAGCTTAGTGGGGAGTTTTTCCAAAATTTAAATGAGCCACTTAATCTAAAGCACCTTAATCTTGCACACAATAGATTTACCATGCAGAAATTCCCATTGGTTAAGATGTTCCCAGAGTTGGATTATCTCAACTTGTCCAAAACTAGCCTTGTTGGTAACATTCCTGATGAAATCTCACAACTGAGTAATTTGAATGCACTTGATCTTTCTATGAATCATCTTACTGGAAAAGTTCCCTTGTTGAGGAATAAATACCTCCAAATTATTGACCTTTCAAACAACAATTTGAGTGGAGAAGTCTCTCCATATTTCTTAGAGAAGCTCCCATTGATGGAGAAGTACAACTTCTCTTACAATAACTTAACCTTCTGTGCTTTAGAAATCAACCATGATATCATGCAAAAGGCATTCTTTGGATCAGTGAACAGTTGTCCAATTGCAGCAAATCCAGCTCTTTTCAAAAGAAGAGCTACCAAACATAAGGGAATGAGGCTTGCTCTGGTATTAACCTTCTCAATGATATGCTTGCTTGCTGGGCTTCTGTTTCTAGCATTTGGTTGCAGAAGGAAGACGATAATGTGGGAAGTTAAGCAAAGTTCTTACAGAGAAGAACAAAATATTTCGGGACCCTTTTCATTCCAGACTGATTCAACTACTTGGGTGGCTGATGTTAAGCAGGCAACATCAGTCCCGGTAGTAATCTTCGAGAAGCCATTGCTGAGTATTACATTTGCTGATCTCTTGTCCGCGACTTCAAATTTCGATAGGGATACTCTTTTGGCAGAAGGAAAATTTGGTCCGGTTTATAGAGGCTTTCTGCCTGGTGGTATTCATGTAGCTGTTAAAGTTTTGGTGGTAGGGTCTACATTGACAGATCAAGAAGCTGCGAGAGAGCTGGAGTTTCTTGGTAGAATCAAGCACCCTAATCTTGTCCCTTTAACAGGATATTGTGTAGCTGGGGATCAAAGGATTGCCATATATGATTACATGGAGAACGGGAACTTACAAAATTTGCTTTATGACTTGCCACTTGGTGTGCGAAGCACAGAAGATTGGAGCGCAGAAACTTGGGAAGAAGCTGACAACAATGGGATTCAAAATGCTGGGTCTGAAGGGTTACTCACAGCTTGGACATTTCGACACAAAATTGCACTTGGCATTGCACGAGCGTTGGCGTTTTTGCATCATGGATGCTCACCTCCAATTATTCATAGAGATGTTAAGGCTAGCAGTGTTTATTTGGATTATGACTTAGAGCCAAGGTTGGCTGATTTTGGTCTGGCTAAGATTTTTGGCAATGGCTTGGATGAGGAGATTGCACGTGGTTCGCCTGGTTATGTTCCACCAGAGTTTTCTCAACCAGAATTTCAGACCCCAACACCAAAATCAGATGTGTATTGTTTTGGTGTTATTCTCTTTGAGCTATTAACTGGAAAGAAGCCGGTTGAAGATGATTATCCTGATGATATGGAAGCAACCTTGGTTAGTTGGGTCAGAGGACTGGTCAGAAGGAATCAAGCTTCAATGGCTATTGATCCCAAAATTCGCGATACAGGACCGCATGAACAAATGGAGGAGGCTCTTAAAATCGGGTATCTGTGCACGGCTGACTTGCCCTCCAAGCGACCGAGCATGCAGCAGATAGTTGGACTAATAAAAGATATTGAACCTAATGCTAATTAG 2544 0.4084 MGLGVFGSFLALTLLFKHLASQQPNTDEFFVSEFLNNMGFYNFTASVCSWERVSCDANREHVFELNFSGMGLTGPIPDTTIGKLSKLQSLDLSFNKITALPSDFWGLSSLKTLNLSSNQISDSFNNIGNFALLETFDLSSNNYSDEIPEAIRSLVKLRVLKLDHNRFSQRITSGILKCKSLVSIDLSSNQLNGTLPDGFGAAFPKLRTLNLAGNNIYGRVSDILELRSIVTLNMSANLFEGSVIDVFHEHLEVLDLSRNRFQGHIPQVQYNSNYSWSHLVYLDLSENELSGEFFQNLNEPLNLKHLNLAHNRFTMQKFPLVKMFPELDYLNLSKTSLVGNIPDEISQLSNLNALDLSMNHLTGKVPLLRNKYLQIIDLSNNNLSGEVSPYFLEKLPLMEKYNFSYNNLTFCALEINHDIMQKAFFGSVNSCPIAANPALFKRRATKHKGMRLALVLTFSMICLLAGLLFLAFGCRRKTIMWEVKQSSYREEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLSITFADLLSATSNFDRDTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVRSTEDWSAETWEEADNNGIQNAGSEGLLTAWTFRHKIALGIARALAFLHHGCSPPIIHRDVKASSVYLDYDLEPRLADFGLAKIFGNGLDEEIARGSPGYVPPEFSQPEFQTPTPKSDVYCFGVILFELLTGKKPVEDDYPDDMEATLVSWVRGLVRRNQASMAIDPKIRDTGPHEQMEEALKIGYLCTADLPSKRPSMQQIVGLIKDIEPNAN 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1179 847 ProSiteProfiles Protein kinase domain profile. 541 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1179 847 Gene3D Ribonuclease Inhibitor 272 419 IPR032675 -
Lal7g1179 847 SUPERFAMILY L domain-like 32 412 - -
Lal7g1179 847 Gene3D Ribonuclease Inhibitor 175 271 IPR032675 -
Lal7g1179 847 Gene3D Phosphorylase Kinase; domain 1 501 616 - -
Lal7g1179 847 SMART LRR_typ_2 84 106 IPR003591 -
Lal7g1179 847 SMART LRR_typ_2 203 226 IPR003591 -
Lal7g1179 847 SMART LRR_typ_2 107 130 IPR003591 -
Lal7g1179 847 SMART LRR_typ_2 154 178 IPR003591 -
Lal7g1179 847 ProSiteProfiles Leucine-rich repeat profile. 86 108 IPR001611 GO:0005515
Lal7g1179 847 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 844 - -
Lal7g1179 847 Gene3D Ribonuclease Inhibitor 25 174 IPR032675 -
Lal7g1179 847 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 844 - -
Lal7g1179 847 Pfam Protein kinase domain 544 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1179 847 Gene3D Transferase(Phosphotransferase) domain 1 617 847 - -
Lal7g1179 847 PRINTS Leucine-rich repeat signature 279 292 - -
Lal7g1179 847 PRINTS Leucine-rich repeat signature 348 361 - -
Lal7g1179 847 SUPERFAMILY Protein kinase-like (PK-like) 526 837 IPR011009 -
Lal7g1179 847 Pfam Leucine rich repeat 76 120 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1179 Lal-Chr7 17555781 17558324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1179 57 843 Receptor kinase-like Gene Family AT4G39400 33.789 1.72e-105 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lal7g1179 Pkinase 8.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1179 - - gmx:100797738 1390.17