Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1171 ATGCCGACAAAGTGTGAGTTATGCTGTGAGATCTTGATCGCTGTCTTTTTACCTCCTTTAGGAGTTTGCCTCCGCCATGGTTGCTGCACTGTTGAATTCATCATTTGCTTGTTGCTTACTATATTAGGGTATATTCCTGGAATAATCTATGCTCTATATTCTATTGTGTTTGTGGATCGCGATCAGTATTTTGATGAAGCTAGGCGTCCACTCTATGCATCACAATACTAG 231 0.4069 MPTKCELCCEILIAVFLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYSIVFVDRDQYFDEARRPLYASQY 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1171 76 PANTHER BNAA03G50460D PROTEIN 1 74 - -
Lal7g1171 76 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 74 IPR000612 GO:0016021
Lal7g1171 76 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016021
Lal7g1171 76 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1171 Lal-Chr7 17520008 17522422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1171 1 75 RCI2 Gene Family AT4G28088 73.333 1.60e-39 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1171 - - lja:Lj0g3v0097159.1 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1171 7 17520008 17522422 Lal7g1171 7 17520008 17522422 ECH