Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1168 ATGCAGCAAGGTGACCAATCATTTATTAGCTTGAGGCCTGGCGGTGGTCGTAGCGGCGGCGCCGGTACCAGATTCCTTGTTCCTCGATTCGACTCTTCTTCGGCTGCAATCCCTGCTTTTGGTTCATTTTCATCTGATCCATCTCTTTCGCATGCTGCTCCTTCTATCAAGGCAGGAGACTCACTGTTTGAGGGTGGCGAGCGCGTGCAATATACTAGAGACCAGCTTTTGCAGCTTCGAGAGGTTACTCTGGTTGGTGAGATTCCCAATGATGTTTTAAAGATCAAACAAGATCTTGATGCAGAACTTTTTGGTGAAGATCGAAGTTGGGGTCGTTCAGAAAACAATCCTCCAAATCCATCTCAAAATCGATATGCTGAGCCATATAACAGTGACTTGCGTGGGCAATCTGGACAGCTTCCTACTAATGCAGATGAGAGGTCTTGGGGTAATCTCAAGGAGAATAGAGACTTTGGCAATAATAATCGTCAAGATCAACTGAATTCTCAGTTTGGAAGGGTACAAATCTCTTCTAATCAGGGGGTAGGAGGACCTGCTCCTACTCTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAAGGGAACTCTCTCTGACAAGGATCGTGTCTTGAAGACTGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAGTTGATCAATTCTGGCATTACATCAGCCGACATATTGAAGGGAGTTATTTCTCTTATTTTCGACAAGGCAGTGTTAGAGCCAACATTCTGCCCCATGTATTCTTTGTTGTGCTCTGATCTTAATGAAAAGTTGCCTCCATTCCCATCCGATGAACCTGGTGGGAAAGAAATCACTTTTAAGAGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATGAACTGAGGGAAGAACTGAGGCAGATGACTGCCCCTGAGCAGGAGATAGAGCGACGAGACAAGGAAAAACTTGTCAAGATTCGAACACTTGGAAATATCCGGTTGATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAGGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCTCCTGACAGCAAAGTCTGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTTGATGAAATACCAAAATCACGACGTATAAATGATGTGTACTTTAGTCGGTTGAATGAATTGAGCACAAATCCCGAACTTGTACCACGACTGAGGTTCATGGTTCGTGATGTTATAGACTTGCGCGCTAATAACTGGATTCCAAGACGCGAAGAGGTGAAAGCCAAAACAATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCGGGTGCCACTGCAAATATGAGAAATACCCGTGTAACTTCTGATGTTTATGGAAGTACCGGTCCTGGGGGCTTCCCCATTGCTCGACCTGGTACAGGGGGTATGATGCCTGGGATGCCAGGGGGCAAGAAGATGCTTGGACTTGATGATGACAACTGGGAGATCCCTAGAACTAGATCTATGATGCCTAGGGGAGGCATGTCTGCCACACAAAATGCTGGACGCGGCCAATCTCCTCTCCTTTCCAAGTCATCAATTGTGAATTCAAAGTTTCTACCTCAAGGCAGTGGTCTTATTAGTGGGAAAAATAGTGCCTTAGTACATGGAGGAGGTGGTCCCCCATCTGCTCGCCCATCAAACTCCGGTATTGCTACTGAGCCTGCATCTCAAATTCCTTCGGCCGTCAAACCTGTTGCTGTGTCCACTGAGGTGTCACAGGCTCCTGCTGCAAAATTGAATACTGATGTTCTTCGCCGGAAAACTGTTTCTCTTCTGGAAGAGTATTTCAGTGTTCGGCTTCTGGACGAGGCAGTACAATGTGTGGAGGAACTAAAATCCCCTGCTTACTATCCTGAGTTTGTGAAGGAAGCCATTTTCCTTGCACTCGATAAAAGCCCACCATGTGTTGAACCTGTTGCCAATCTTCTTCAGCATCTGTTTATTAAGAAAATTCTTTCTGCAAGAGACATAGGGACTGGCTGCTTGTGGTTTGGTTCTATGCTGGATGATATTGGTATAGATTTACCGAAGGCGCCAAATAATTTTGGCGAGATAACAGGGAAATTGATTTTAGCCGGGGGTTTGGATTTTAAGGTGGTAAGAGAGATCCTTAAGAAGGTAGAGGATGGTCGGTTCCAGAAAGCAATATTTGATACTGCAGTACAGGTAATTACCACTGCATCTGCTCAAGCTGTGCTGGATTCACAAGCATCTGATATTGAAGCTTGTAGGAGTGTCTTAAACTGA 2355 0.4497 MQQGDQSFISLRPGGGRSGGAGTRFLVPRFDSSSAAIPAFGSFSSDPSLSHAAPSIKAGDSLFEGGERVQYTRDQLLQLREVTLVGEIPNDVLKIKQDLDAELFGEDRSWGRSENNPPNPSQNRYAEPYNSDLRGQSGQLPTNADERSWGNLKENRDFGNNNRQDQLNSQFGRVQISSNQGVGGPAPTLVKAEVPWSARKGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLINSGITSADILKGVISLIFDKAVLEPTFCPMYSLLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADELREELRQMTAPEQEIERRDKEKLVKIRTLGNIRLIGELLKQKMVPERIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDEIPKSRRINDVYFSRLNELSTNPELVPRLRFMVRDVIDLRANNWIPRREEVKAKTITEIHSEAEKNLGLRPGATANMRNTRVTSDVYGSTGPGGFPIARPGTGGMMPGMPGGKKMLGLDDDNWEIPRTRSMMPRGGMSATQNAGRGQSPLLSKSSIVNSKFLPQGSGLISGKNSALVHGGGGPPSARPSNSGIATEPASQIPSAVKPVAVSTEVSQAPAAKLNTDVLRRKTVSLLEEYFSVRLLDEAVQCVEELKSPAYYPEFVKEAIFLALDKSPPCVEPVANLLQHLFIKKILSARDIGTGCLWFGSMLDDIGIDLPKAPNNFGEITGKLILAGGLDFKVVREILKKVEDGRFQKAIFDTAVQVITTASAQAVLDSQASDIEACRSVLN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1168 784 MobiDBLite consensus disorder prediction 106 165 - -
Lal7g1168 784 Pfam MIF4G domain 210 436 IPR003890 GO:0003723|GO:0005515
Lal7g1168 784 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 783 - -
Lal7g1168 784 SMART ma3_7 620 732 IPR003891 -
Lal7g1168 784 MobiDBLite consensus disorder prediction 569 591 - -
Lal7g1168 784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 783 IPR045208 GO:0003743
Lal7g1168 784 MobiDBLite consensus disorder prediction 112 165 - -
Lal7g1168 784 SUPERFAMILY ARM repeat 615 762 IPR016024 -
Lal7g1168 784 MobiDBLite consensus disorder prediction 1 23 - -
Lal7g1168 784 Gene3D - 201 437 - -
Lal7g1168 784 Pfam MA3 domain 620 732 IPR003891 -
Lal7g1168 784 MobiDBLite consensus disorder prediction 518 543 - -
Lal7g1168 784 MobiDBLite consensus disorder prediction 527 543 - -
Lal7g1168 784 SUPERFAMILY ARM repeat 203 438 IPR016024 -
Lal7g1168 784 ProSiteProfiles MI domain profile. 619 741 IPR003891 -
Lal7g1168 784 Gene3D - 613 778 - -
Lal7g1168 784 SMART if4_15 210 436 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1168 Lal-Chr7 17501709 17507606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1168 1 782 Eukaryotic Initiation Factors Gene Family AT5G57870 61.982 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1168 K03260 - gmx:100781275 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1168 7 17501709 17507606 Lal7g1168 7 17501709 17507606 ECH
Lal14g1856 14 18112056 18117209 Lal7g1168 7 17501709 17507606 LSH
Lal7g1168 7 17501709 17507606 Lal19g1409 19 16800560 16804349 LSH