Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1164 ATGGCCCAAACGTGGTGGTGCTTTGTTCACTATCTTGTGTGGGCCATTTCCACTGTTCTTGTTCTCACAGCAATACCATCTTCTTCTTCTTATCAAATCCATGACAAGGTTGGTACCCTTCCTGGTCAAAACTTCAACATCAACTTTTCTCACTATTCTGGTTATGTTACTGTCAATGATGAAGCTGAAAGGGCACTATTTTACTGGTTTATTGAGGCTGATCAATACCCTCAAACCAAGCCACTTCTTTTATGGTTCAATGGAGGGCCTGGATGCTCATCAATTGCTTATGGGGAGGCAGAGGAAATTGGCCCCTTTCATATACAACCAGATGGAAAGACCCTTTATCTGAATCCTTACTCTTGGAACCAAGTTGCAAACATTCTTTTTGTGGATTCTCCTGTTGGAGTTGGATTTTCATATTCGAACACTTCATCTGACATTCTGAACAACGGTGACAAGAGGACTGCTGAAGACTCTTTAATATTCCTATTGAGGTGGTTTGAGCGTTTTCCCCAATATAAAGGAAGGGACGTCTTTATTTCTGGAGAGAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGCTATTGTAAAGTACAATTTTGGAAATAAGGAAAATGCTATAAATCTGAAAGGTTACATGGTTGGAAATGCTCTTACTGATGATTTCCATGACCATTTGGGGGTTGCTCAGTTTATGTGGTCAAGTGGTCTGATATCTGATCAAACATACAATCTCTTGAACATTCTTTGTGGCAATCAGTCATTTGTGCACCCTTCAGAAGCATGTGAGAAAATTCAAGAAGTTGCTGATAGAGAACTTGGCAACATTGATCCATACAGTATCTTTACTCCTCCGTGTTCTGCTAATCTTAGCCAGTCAACTCAGCTGCTGAGAAGAAAGCATAGAATTGGTAAACTCAATGAAGCATACGATCCTTGCACCGAGAAACACTCTACCATGTACTTCAATCTACCGGAGGTTCAAAAGGCACTTCATGTTGATTCAGCTCATAAGCCTGCTAAATGGGATACCTGCAGTGATGAGGTAAATAACAACTGGAAGGATTCTCCAAGAACTGTGCTTGATATTTATCGCGAGCTTATTCCTTTAGGGCTGAGGATATGGATGTTCAGTGGCGACACAGATGCCGTAATCCCAGTGGCGTCAACTCGCTACACTATAGATGCTCTTAGGCTTCCAACAGTGAGATCTTGGCGTCCATGGTATAATGATGGGCAAGTCGCAGGATGGATACAAGAATATGCAGGACTTACCTTTGTGGCAGTAAGGGGAGCAGGGCATGAAGTTCCTCTGCATAGACCTAAACTTGCTCTTGCACTCATTAAAGCCTACTTAGCTGGAACCTCCTTGCCAGCCATTGAGCTTGTCAGTGTGTATTAA 1410 0.4234 MAQTWWCFVHYLVWAISTVLVLTAIPSSSSYQIHDKVGTLPGQNFNINFSHYSGYVTVNDEAERALFYWFIEADQYPQTKPLLLWFNGGPGCSSIAYGEAEEIGPFHIQPDGKTLYLNPYSWNQVANILFVDSPVGVGFSYSNTSSDILNNGDKRTAEDSLIFLLRWFERFPQYKGRDVFISGESYAGHYVPQLSQAIVKYNFGNKENAINLKGYMVGNALTDDFHDHLGVAQFMWSSGLISDQTYNLLNILCGNQSFVHPSEACEKIQEVADRELGNIDPYSIFTPPCSANLSQSTQLLRRKHRIGKLNEAYDPCTEKHSTMYFNLPEVQKALHVDSAHKPAKWDTCSDEVNNNWKDSPRTVLDIYRELIPLGLRIWMFSGDTDAVIPVASTRYTIDALRLPTVRSWRPWYNDGQVAGWIQEYAGLTFVAVRGAGHEVPLHRPKLALALIKAYLAGTSLPAIELVSVY 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1164 469 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Lal7g1164 469 Pfam Serine carboxypeptidase 41 456 IPR001563 GO:0004185|GO:0006508
Lal7g1164 469 Gene3D alpha/beta hydrolase 32 291 IPR029058 -
Lal7g1164 469 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 14 463 - -
Lal7g1164 469 SUPERFAMILY alpha/beta-Hydrolases 37 460 IPR029058 -
Lal7g1164 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 463 IPR001563 GO:0004185|GO:0006508
Lal7g1164 469 Gene3D - 316 354 - -
Lal7g1164 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Lal7g1164 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lal7g1164 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Lal7g1164 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Lal7g1164 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Lal7g1164 469 Gene3D - 363 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1164 Lal-Chr7 17478735 17483078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1164 326 460 Calmodulin-binding Proteins AT2G22960 25.735 8.50e-11 59.3