Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1159 ATGGCTCTCATTCTAAATTCCGTTACTCTCTTTCTCTTCTTCCTCTCACGTGTCGCTCTATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGAACCTCGTAACCATGAAGTGGAGGCTTTGATGAGTATAAGAGAAGGTTTGAGTGATCCACATGGTGTGTTAAGCAACTGGGATGAATATTCTGTTGATGCTTGTAGTTGGGCTATGATTACTTGTTCATCTGATTCCCTTGTTATTGGATTTGGAGCACCTAGTCAATCTCTCTCTGGAACTTTATCTCCTGCAATTGCTAATCTCACCAATCTTCAACAAGTGTTACTGCAGAATAACAATATTTCAGGCAAAATCCCACTGGAGCTTGGAACCCTTCCCAAGCTTCAGACTTTGGATCTTTCTAATAATCATTTCTCTGGGGTCATTCCTGCATCTTTGAGTCAGTTGAATACTCTTCAGTACCTGAGGCTCAACAACAATAGTTTATCTGGACCTTTTCCTTTGTCACTTGGCAAAAACCCACAACTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCCAGTGTTGTGGGGAACCCATTAATTTGCGGAAGCAGCTCTGTTGAAGATTGCTCTGGAACAGTAACCTTCATGCCTGTTCCCCTTTCCCAAGCATTGTCACAAGGGAAACAAAAGTCCAAAAAACTAGCAATTGCACTTGGAGTCAGCCTTAGTTGTGCTTCTCTCATGCTTCTCTTTTTTGGACTCGTTTGGTATAGAAAGAAACAACAATATCAAGCCACACTTTATATTAGTGGTTATAAGGAAGAGGGAGTTGTTAACTTGGGAAATCTAAAAAAATTCACTTTCAGAGAGCTTCAACATGCAACCGATAATTTCAGCTCCAAGAGCATACTTGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGGAAGTTTGGAGACGGCACAATGGTGGCTGTGAAAAGACTGAAAGATGTAACGGGAAGTGCTGGCGAGTCACAGTTCCAAACAGAATTGGAGATGATCAGCTTGGCAGTTCACCGCCATTTACTTCGCTTAATTGGATATTGTGCTACTCCTAGTGAAAAACTTCTGGTTTATCCTTATATGTCCAATGGCAGCGTGGCGTCCAGGCTTAGAGGGAAGCCAGCTTTAGATTGGAACACAAGAAAGAGTATTGCAATTGGAGCTGCCAGAGGTCTTTTGTATCTGCATGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCTGCTAATGTGCTTCTGGATGACTATTGTGAAGCTGTAGTAGGTGATTTCGGCCTTGCAAAGCTCTTGGACCATGCTGATTCCCATGTCACCACTGCCGTCCGTGGCACCGTTGGGCACATTGCACCGGAGTACCTTTCCACTGGCCAATCATCTGAGAAAACTGATGTATTTGGATTTGGCATTCTCTTGTTAGAGCTCATAACAGGAATGACTGCTTTGGAGTTTGGAAAAACGGTGAATCAAAAAGGCGCTATGCTAGAGTGGGTTAAGAAAGTACAGCATGATAAGAAGGTTGAAGTGTTGTTGGACAGAGAGCTTGGGAGCAACTATGATAGAATAGAGGTGGGGGAGATGCTGCAAGTAGCTTTACTTTGCACTCAAAATTTGCCTGCCCACCGTCCCAAAATGTCGGAAGTGGTCCGAATGCTCGAAGGTGATGGGCTCGCGGAGAAGTGGGCAGCATCACATAATCATAGTAGTCAAGGCATCACCCCTTGTCACAGCAACAGTAGCAGTAGTTCATCCCGCCCTACCTCTTCTGCTTCAAAACATGATGACACTGCTCATGATCGTTCAAGCATGTTTGGCATGACAATGGATGATGATGATGATCGTTCATTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGATGA 1935 0.4367 MALILNSVTLFLFFLSRVALSSSSSSSSSSSEPRNHEVEALMSIREGLSDPHGVLSNWDEYSVDACSWAMITCSSDSLVIGFGAPSQSLSGTLSPAIANLTNLQQVLLQNNNISGKIPLELGTLPKLQTLDLSNNHFSGVIPASLSQLNTLQYLRLNNNSLSGPFPLSLGKNPQLAFLDLSYNNLSGPLPKFPASVVGNPLICGSSSVEDCSGTVTFMPVPLSQALSQGKQKSKKLAIALGVSLSCASLMLLFFGLVWYRKKQQYQATLYISGYKEEGVVNLGNLKKFTFRELQHATDNFSSKSILGAGGFGNVYRGKFGDGTMVAVKRLKDVTGSAGESQFQTELEMISLAVHRHLLRLIGYCATPSEKLLVYPYMSNGSVASRLRGKPALDWNTRKSIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVKKVQHDKKVEVLLDRELGSNYDRIEVGEMLQVALLCTQNLPAHRPKMSEVVRMLEGDGLAEKWAASHNHSSQGITPCHSNSSSSSSRPTSSASKHDDTAHDRSSMFGMTMDDDDDRSLDSYAMELSGPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1159 644 MobiDBLite consensus disorder prediction 579 644 - -
Lal7g1159 644 SUPERFAMILY Protein kinase-like (PK-like) 283 570 IPR011009 -
Lal7g1159 644 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 644 - -
Lal7g1159 644 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
Lal7g1159 644 MobiDBLite consensus disorder prediction 580 607 - -
Lal7g1159 644 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Lal7g1159 644 SUPERFAMILY L domain-like 34 195 - -
Lal7g1159 644 MobiDBLite consensus disorder prediction 608 635 - -
Lal7g1159 644 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 644 - -
Lal7g1159 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Lal7g1159 644 Gene3D Phosphorylase Kinase; domain 1 271 376 - -
Lal7g1159 644 ProSiteProfiles Protein kinase domain profile. 300 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1159 644 Gene3D Ribonuclease Inhibitor 34 213 IPR032675 -
Lal7g1159 644 Gene3D Transferase(Phosphotransferase) domain 1 377 588 - -
Lal7g1159 644 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Lal7g1159 644 Pfam Protein tyrosine and serine/threonine kinase 303 569 IPR001245 GO:0004672|GO:0006468
Lal7g1159 644 SMART serkin_6 300 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1159 Lal-Chr7 17436449 17441511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1159 11 644 Receptor kinase-like Gene Family AT5G16000 62.133 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal7g1159 PK_Tyr_Ser-Thr 9.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1159 - - gmx:100797186 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1159 7 17436449 17441511 Lal7g1159 7 17436449 17441511 ECH
Lal14g1753 14 17479992 17487194 Lal7g1159 7 17436449 17441511 LSH