Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1143 ATGCTTTCGGGATCTTGTGTGAGTCTATTGAATTTGGTATCACATGATGATTACCAAGTTTCTAATGTAATGACGGTTACACCAGAGTTCGAGATCGCTCATGCCAATAACGACCGTTCGAATTCAGGATCCGACGATGTCGTTTCAAACTCCTCGAGCGAACGGAGAATCATCGTCGCGAACCAGTTACCCATTCGCGCATCACGCGACGCTGAAACAAAGAAATGGACTTTCGAATTCGACAGTGATAGCTTGGTTCTCCAGCTCAAAGACGGGTTCCCCTCCGACACGGAGGTTCTCTACGTCGGTTCCTTAAACGCCGACGTCGAATTTTCCGAACAGGATGACGTGGTGCAAACCTTGTTAGAGAAATTCCGTTGTGTTCCAACGTTCATCCCCACAGAAGTTCAAAACCTTTTCTACCATGGGTTCTGCAAGCATTACCTGTGGCCAATTTTTCACTACATGCTTCCTCTTTCACCGAGCCACGGTGTACGCTTTGAACTTTCTCAGTGGCTAGCGTACGTTTTGGCTAACAAGATCTTCGCTGATAAAGTAACCGAGGTGATAAATCCTGACGAGGATTACGTTTGGGTCCACGATTATCACCTCATGATCTTGCCCACTTTTTTGAGGAAGCGTTTCCACCGTGTCAAGCTAGGGTTTTTCTTGCACGGTCCTTTTCCTTCGTCGGAAATCTATAGAACTATACCAGTTCGTGATTATATCCTTCGTGCCTTTCTGAATTGTGATTTGGTGGGGTTTCACACTTTTGATTACGCAAGGCATTTTTTGTCTTGTTGTAGCAGGATGTTGGGGTTGGATTACGAGTCAAAGAGGGGATATATTGGGTTAGATTACTATGGTAGAACTGTTACTATTAAGATTTTACCGGTTGGGATTCACATGGGTCAACTTGAATCTGTTTTGTCTTTGTCTGAGACTGCAAAGAGGGTTAAGGAGTTGAAGGAGGAGTATGAGGGCAAAATTGTGATTTTGGGCGTGGATGACATGGATTTGTTTAAAGGTATTAGTTTGAAGTTTTTGGCAATGGGGCAGCTTTTGGAGGTGCACCATGATTTGAGGGGTAGAGTGGTATTGGTTCAGATTCTTAACCCTGCAAGGAGCAGTGGGAAAGATATTCAGGATGTTGAGGATGAGACTAAGGCTATTGCTATGGAGATTAATGAGAAGTATGGTGAACCGGGGTATCAACCAATTGTTGTCATCAATGGCCCTGTCTCGACGCCGGAGAAAGCTGCATACTATGCTATTGCTGAGTGTTGTGTTGTGAATTGTGTTAGGGATGGAATGAATTTGGTGCCTTATACGTACACTGTCTGCAGACAAGCAAGGGTTGCATTTGACAAGGGACTTGGTCTCGAAGATGAAGTCGTGAGGCCTCAGCATAGTGTTATAATTGTTTCTGAGTTCATCGGTTGCTCACCATCTCTAAGCGGAGCAATTCGAGTGAATCCTTGGAACATTGATGATGTGTCTGTGGCCATGACTTCAGCTATCAAAATGTCGGAGGCTGAGAAGCATTTGCGCCACGAGAAGCATTTTAAGTATATAAGCTCTCATGATGTGGCATATTGGGCTAGGAGTTTTGATCAGGATTTGGAGAGAGCTTGTAGAGAGCATTACCGCAAGAGGTGTTGGGGTGTTGGATTTGGTTTGGGGTTCAGAATCGTTGCTTTGGATCCTACATTTAGGAAGCTTTCCATGCAAAAGATTGTCTCTGCCTATACTCAAACACAGAATCGGTTGATCCTTTTGGACTATGATGGCACCATGATGCCACAGGCCGCAATAGATAAAACTCCTAGCAGCAAAGTTATCTCTGTGCTGAACTATTTATGCAATGATCCGAACAATATAGTTTTCATTGTTAGTGGCAGGGATAAGGATTGCCTAAGCAAATGGTTTTCTCCATGTGAGAAATTGGGTCTCTCTGCTGAGCATGGTTATTTCACTAGGTGGAGTAGAGATTCTCCATGGGGGACATGTGGATTATATAAGGACTTTGATTGGAAAAATATCGCAGAGCCCGTGATGGCTCACTATACAGAAGCAACTGATGGTTCTTTCATTGAACAGAAAGAAAGCGCAATGGTTTGGCATCATCAAGAAGCGGATCCTCATTTTGGATCCTCCCAAGCAAAAGAGCTTCTTGATCACCTGGAGAGTGTGCTGGCAAATGAGCCAGTAGTGGTTAAGAGGGGACAACACATAGTTGAAGTAAAACCTCAGGGTGTGAACAAAGGTATAGTTGTGGAAAACCTTATCTCAACCATGAGAAAGGAGGGAAAGTCACCAGATTTTCTGCTATGCATAGGAGATGATCGTTCAGATGAAGATATGTTTGAGAGCATTGCTAGTTCAGTTTCTAATCCAGCATTGCCAACTATTTCACAAGTGTTTGCATGCACTGTTGGTCAGAAACCAAGCATGGCAAAATACTATTTGGATGATACTAGTGAAGTTATCAATTTGCTAGAAGGACTTACAACTGCATCAGCAGCAACAAGAATATGA 2538 0.4366 MLSGSCVSLLNLVSHDDYQVSNVMTVTPEFEIAHANNDRSNSGSDDVVSNSSSERRIIVANQLPIRASRDAETKKWTFEFDSDSLVLQLKDGFPSDTEVLYVGSLNADVEFSEQDDVVQTLLEKFRCVPTFIPTEVQNLFYHGFCKHYLWPIFHYMLPLSPSHGVRFELSQWLAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHGPFPSSEIYRTIPVRDYILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLESVLSLSETAKRVKELKEEYEGKIVILGVDDMDLFKGISLKFLAMGQLLEVHHDLRGRVVLVQILNPARSSGKDIQDVEDETKAIAMEINEKYGEPGYQPIVVINGPVSTPEKAAYYAIAECCVVNCVRDGMNLVPYTYTVCRQARVAFDKGLGLEDEVVRPQHSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSVAMTSAIKMSEAEKHLRHEKHFKYISSHDVAYWARSFDQDLERACREHYRKRCWGVGFGLGFRIVALDPTFRKLSMQKIVSAYTQTQNRLILLDYDGTMMPQAAIDKTPSSKVISVLNYLCNDPNNIVFIVSGRDKDCLSKWFSPCEKLGLSAEHGYFTRWSRDSPWGTCGLYKDFDWKNIAEPVMAHYTEATDGSFIEQKESAMVWHHQEADPHFGSSQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVNKGIVVENLISTMRKEGKSPDFLLCIGDDRSDEDMFESIASSVSNPALPTISQVFACTVGQKPSMAKYYLDDTSEVINLLEGLTTASAATRI 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1143 845 Gene3D Glycogen Phosphorylase B; 47 308 - -
Lal7g1143 845 Gene3D Glycogen Phosphorylase B; 309 526 - -
Lal7g1143 845 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 590 792 IPR006379 -
Lal7g1143 845 CDD GT20_TPS 55 542 IPR001830 GO:0003824|GO:0005992
Lal7g1143 845 Pfam Trehalose-phosphatase 592 827 IPR003337 GO:0003824|GO:0005992
Lal7g1143 845 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 842 - -
Lal7g1143 845 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 546 - -
Lal7g1143 845 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 842 IPR001830 GO:0003824|GO:0005992
Lal7g1143 845 Gene3D - 717 844 IPR023214 -
Lal7g1143 845 Gene3D - 588 690 IPR023214 -
Lal7g1143 845 SUPERFAMILY HAD-like 589 836 IPR036412 -
Lal7g1143 845 CDD HAD_TPP 590 831 - -
Lal7g1143 845 Pfam Glycosyltransferase family 20 55 542 IPR001830 GO:0003824|GO:0005992
Lal7g1143 845 TIGRFAM T6PP: trehalose-phosphatase 588 837 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1143 Lal-Chr7 17323931 17327285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1143 10 844 Trehalose Biosynthesis Gene Families AT2G18700 68.892 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1143 K16055 - gmx:100810498 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1741 14 17396384 17404489 Lal7g1143 7 17323931 17327285 LSH