Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1128 ATGGAACCCACACATGATGATCAAGAAGAGTTCATTTTCCGTTCCAAACTCCCTGACATCTATATCCCAACACACCTTCCATTACACACTTACCTCTTCCAAAACCTATCCCAATTCAAAGATCGCCCATGCCTCATTGACGGCGACACCGGTGAGACATTCACTTACGCCGACGTGGAACTCATCGCCCGTAAAGTCTCCGCCGGTCTCTACAATATTGGCATCAAACAATATGACGTCATCCTCATCCTTCTCCATAATTGCCCTCAATTCGTGTTCGCTTTCCTCGGTGCTTCTTACTGCGGCGCCATCGTCACCCCCGCCAATCCCTTATATACAACAGCTGAAGTTGTGAAACAAGCCACCGCATCAAACTCCAAGCTCATCATAACACAATCCTCCTGCGTCGAAAAAGTAAAGGATTTCGCAAGAGAAAACGGCATCAAAGTTATGTGCATTGACACGCCACCAGAGGGCGATTACTTGAACTTTTCTGAGTTGATCAACTCTGATGAGAGTGATATCCCTACAGTGCAAATATCAACGGACGACGTCGTTGCACTACCTTATTCTTCCGGCACCACAGGGAAACCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTCACAACCGTGGCGCAACAAGTTGATGGAGAGAACCCTAATATTTATTTACACAGCAAAGACGTGACACTATGCGTGTTGCCACTCTATCACATTTATTCAATTAACTCTGTTTTGCTCTGTGGACTTAGAGTTGGTGCTACAATTTTGACCATGCAAAGGTTTGAGATCATTAAGATGTTAGAGTTGGTTCAAAAACATAAGGTGACTTTTGCACCATTTGTGCCTCCCATCCTTTTGGCAATAGTGAAAAATCCTGAAGTGGAACGATACGACATGTCGTCGATTAGAATGATTATGTCTGGTGCAGCTCCTTTGGGAAAAGAACTTGAAGAAGCTGTGTGTGCTAGGCTTCCCAACGTTACACTTGGACAGGGTTATGGAATGACCGAAGCGGGACCAGTGCTCTCGTTGTGCTTAGCGTTTGCAAAGGAACCATTTGAGGCTAAATCAGCTTCATGTGGAACCGTTGTAAGAAATGCAGAGATGAAGATCGTTGATCCTGATACAGGGGCTTCCCTTCCCAGGAATAAATCTGGTGAAATTTGCATTAGAGGCAACCAGATTATGAAAGGTTACCTAAACGACCCAGAAGCCACAAAAATAACCATAGACGAAGGGGGTTGGTTGCACACGGGTGATATTGGTTATATCGCTGATAATGATGAAGTTTTCGTTGTTGATCGATTAAAGGAGATAATCAAATACAAAGGATATCAAGTTGCTCCTGCTGAGCTTGAAGACATTTTGTTTGCCCACCCAGACATTCTCGACGCTGCTGTTATATCCATGGAAGATGAGGTTGCAGGGGAGGTTCCGGTTGCATATGTTGTAAGGTCAACTGGTTCTGAGATCTCAGAGGATGAAATCAAGCAATATATCTCGAACCAGGTTGTGTTTTATAAAAGAATCAGGCGGGTTTTCTTTGTGGGCTCAATTCCAAAGGCACCCTCGGGCAAGATTTTGAGGAAAGACCTCAGAACAAGGCTTGCAGTAGTTCCTATACATAAGAAAATTAGAACAAACTAG 1653 0.4422 MEPTHDDQEEFIFRSKLPDIYIPTHLPLHTYLFQNLSQFKDRPCLIDGDTGETFTYADVELIARKVSAGLYNIGIKQYDVILILLHNCPQFVFAFLGASYCGAIVTPANPLYTTAEVVKQATASNSKLIITQSSCVEKVKDFARENGIKVMCIDTPPEGDYLNFSELINSDESDIPTVQISTDDVVALPYSSGTTGKPKGVMLTHKGLVTTVAQQVDGENPNIYLHSKDVTLCVLPLYHIYSINSVLLCGLRVGATILTMQRFEIIKMLELVQKHKVTFAPFVPPILLAIVKNPEVERYDMSSIRMIMSGAAPLGKELEEAVCARLPNVTLGQGYGMTEAGPVLSLCLAFAKEPFEAKSASCGTVVRNAEMKIVDPDTGASLPRNKSGEICIRGNQIMKGYLNDPEATKITIDEGGWLHTGDIGYIADNDEVFVVDRLKEIIKYKGYQVAPAELEDILFAHPDILDAAVISMEDEVAGEVPVAYVVRSTGSEISEDEIKQYISNQVVFYKRIRRVFFVGSIPKAPSGKILRKDLRTRLAVVPIHKKIRTN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1128 550 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Lal7g1128 550 Gene3D - 4 438 IPR042099 -
Lal7g1128 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 538 - -
Lal7g1128 550 CDD 4CL 22 534 - -
Lal7g1128 550 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Lal7g1128 550 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 538 - -
Lal7g1128 550 Pfam AMP-binding enzyme 34 444 IPR000873 -
Lal7g1128 550 Gene3D - 439 540 IPR045851 -
Lal7g1128 550 SUPERFAMILY Acetyl-CoA synthetase-like 6 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1128 Lal-Chr7 17189396 17192776 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1128 4 506 Monolignol Biosynthesis Gene Families AT1G51680 63.992 0.0 675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1128 7 17189396 17192776 Lal7g1128 7 17189396 17192776 ECH
Lal14g1720 14 17263752 17269674 Lal7g1128 7 17189396 17192776 LSH
Lal7g1128 7 17189396 17192776 Lal19g1269 19 15856429 15862967 LSH