Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1127 ATGTATGGTTATGGAATGAGCGATGGGATAGTCTCATTGTCCTTAGCATTTGCAAAGGAACCACTTGAGGTGAAATCAGGTTCATTCGGGACCGTCGTAAGAAATGCGGAGATGAAGATTGTTGATCTTGATAAAGGCGCTTCGCTTCCCAGAAATAAAGCTGGTGAGATTTGCATTAGAGGCAACCATATCATTAGAGATGACAATGAAAACCGAACCTGCGGGTACCCGTCCGAACCTAACCCGAATTTAACGGGGAAAACCCGATGTGATTGGGTTCGGGTTTTACCCGGGTTCAAATTTCGGGTTCGGGTTTGGTATTGTTAA 327 0.4495 MYGYGMSDGIVSLSLAFAKEPLEVKSGSFGTVVRNAEMKIVDLDKGASLPRNKAGEICIRGNHIIRDDNENRTCGYPSEPNPNLTGKTRCDWVRVLPGFKFRVRVWYC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1127 108 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 3 67 - -
Lal7g1127 108 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 67 - -
Lal7g1127 108 Pfam AMP-binding enzyme 3 66 IPR000873 -
Lal7g1127 108 Gene3D - 1 94 IPR042099 -
Lal7g1127 108 SUPERFAMILY Acetyl-CoA synthetase-like 3 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1127 Lal-Chr7 17183535 17183861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1127 3 80 Monolignol Biosynthesis Gene Families AT3G21240 58.750 3.61e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1127 K01904 - ncol:116250614 96.2857