Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1119 ATGAACAGTAGTTTTGACACCCAAAGACAAGACTCGCTCAAAAGGAGAGGGCAACAACAAATTATGGGGGCAGCTTCAAATTCTTCTTCTCTAGCTTTTTACGGTAATAGTAATAATAATAATAGAAATTCTACAAACAAATTCCAAGGGTTTCTTGGGGATGACGATGATCTAGTTTCCACAGTAGTTCCTGCAGTGACAGTGGTGCTTGAAGGTCGTTCAATCTGTCACCGTATCAGCCTCCATAATCACTCTAGTTATCAAAGCCTAGCCAAGGAACTTAGACAAATGTTTGTGGATGAAAACATGGAGAATGATGATAATCTTGATCTGTTCAATGCTATTCCTGGTCACCTTATTGCTTATGAAGACATGGAAAGTGATCTTCTTCTTGCTGGTGATCTTACTTGGAAGGATTTTGTACGTGTTGCAAAGAGAATTCGGATAGTTCCAGCCAAGGGGAACACAAGGAAAGCTACAACTAGTACAACAGAAGAAGCATACGTGAGATCACCTGCACAATTGTTTGGTTAA 534 0.3989 MNSSFDTQRQDSLKRRGQQQIMGAASNSSSLAFYGNSNNNNRNSTNKFQGFLGDDDDLVSTVVPAVTVVLEGRSICHRISLHNHSSYQSLAKELRQMFVDENMENDDNLDLFNAIPGHLIAYEDMESDLLLAGDLTWKDFVRVAKRIRIVPAKGNTRKATTSTTEEAYVRSPAQLFG 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1119 177 Pfam AUX/IAA family 50 150 IPR033389 -
Lal7g1119 177 SUPERFAMILY CAD & PB1 domains 75 149 - -
Lal7g1119 177 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 159 IPR003311 GO:0005634|GO:0006355
Lal7g1119 177 MobiDBLite consensus disorder prediction 1 23 - -
Lal7g1119 177 PANTHER AUXIN-RESPONSIVE PROTEIN IAA33 4 159 - -
Lal7g1119 177 Gene3D - 60 164 - -
Lal7g1119 177 ProSiteProfiles PB1 domain profile. 63 154 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1119 Lal-Chr7 17133164 17134710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1119 66 152 B3 DNA Binding Superfamily AT2G46530 28.409 4.63e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lal7g1119 AUX_IAA 5.3e-13 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1119 - - cit:102608997 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1119 7 17133164 17134710 Lal7g1119 7 17133164 17134710 ECH
Lal14g1712 14 17237163 17238931 Lal7g1119 7 17133164 17134710 LSH