Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1115 ATGGCTGCTGATTTGTCTTGTGAGGGTGTTGCGCTCGATCCTTCTAAATGCAGTATGTTGAGTATGGACGAAAAAAGAGAACTTGTATATGAAATATCTAAGTCTCATGGTGCATCCGAGATGCTCCAGTCATGGAGTCGCCAAGAGATTTTACAAATCTTGTGTGCAGAGATGGGAAAAGAAAGGAAGTATACTGGGCTGACAAAGTTGAAAATTATAGAACACCTTCTAAAAATTGTTTCTGAAAAGAAATCAGAGGGCCATGGAACAGATTCTGAACTACACTCTTCTGCTGCACATGGTCAGCAATGTGCAAAAAGGCAGAGAAAAATTGAGAATCCATCTCGATTACCTGTGCCTGCAAACAATATTTCAGCCATTAATGATGGCGATATGGGTATTGCCTCATATTGCAAAAACTCAGCTTGCAAAGCTATCTTAAATCAAGCAGATGTGTTTTGCAAAAGATGCTCATGCTGCATTTGCCATCAATATGATGACAACAAAGACCCAAGCCTGTGGTTAATATGTAGCTCCGAGTCTCCATTTCCTGGTGTTTCGTGTGGCTTGTCATGCCACCTCGAGTGTGCTTTAAAACATAATGGTTCTGGCATTGGCAAAATCAGTGAACGTCTCAAGCTTGATGGAGGCTTCTACTGTGTTTCTTGTGGGAAAGTAAATGATTTACTCGGATGTTGGAGAAAGCAACTGATGGTAGCTAAAGATACCAGACGTGTGGACATACTCTGTTATCGTGTCTCCTTAAGCCAAAGACTTTTACAAGGGACTGAAATTTATCAAGAACTTCATGAAATTGTTGATGAAGTGGTGAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGATCACCGGCGAAGATTGGTAGGGGGATTGTGAACAGGCTTTCATCAGGACCAGAAGTTCAAAAACTCTGTGGTCTGGCTGTCGAATCACTTGATTCACTGCTTTCTAAAAGGATCTTGCCTTCACCACCTGCTCCAACAATTCAAGGTGGTGACTCTGCCCCCCTCCAATTTCCCTTGTTGCTCTGTGCTAATATGCTTGGTCCAAATATGTTGAGGTTTGAAGATGTCACGGCGACATCCCTCACTGTTATTTTGGGTTCTGAAGGCCCTTCTAGAGAAAATATTGCAGGTTACACCTTGTGGCATCGCAAAGTTGATGATGTGGACTATCCAGTGGAGCCGACTTGCACTTCGCTTCTACCAAATAGGAGGTTCAGTATCAAGGGTTTAACTCCAGCTAGAGAATACATTTTCAAAGTTGTCTCCAATGATTTGAGGGAGTTGGGCATGTGCGAAGTTCATATCTCAACAGAGCATGGTGAGGACGAGGTCCCTATTTGCTCAGCAACAGAGAGAAGTCAGAGCCCAGCAACCAACTGTAGCAGCCTTTCCAATCCGTCATCAGTTGAAGATGAAACTAATAACAGTAATCCATATAGTGATCAGACTGGTAATCAAGCAAACCATTATCATACTTTTTACAAGGATTCTGGCCAACTTGCTTCTGGAAATTTGTCTAATGATGCTATGAACTGTTCCAATAATATAGTTGGAGTGGGACCTCCCACTGATGCAGATTCCTTATCAGACAAACAGCATGCTGCTGGAACGGCTGGTTCTATACCTGCCCCTGATGTACTAAAGCTTGAAAACAAGCATTCACGGGAGGAACAAGTCACCGAGGACATGAGCATTGATGACGGATTGAATTCCCCCATTCAAACTGGGAAGGAATGTGTGCCATTAGTAGGTACCTCAGAAGGAGGCTTGCCCAATACTCCTTGCAAGTTGGAAATACTTAAAGATGGGCCAGGAAGAAATGGTAGATCTAAATCCGGTGGCAAAGATCTAGAAAATGGATCTGGGAAAAGGGAGGGGCCCCAAGATGGAAGCACATCCAAGAAGGGAAGTGGGGAAAGACAAGATGAAGGGTGTACTGATCGCGATTTTGAGTATTATGTGAAGGTGATTAGATATTTAGAATGTGAAGGACATATTGAAAAGAACTTCAGGCAAAAGTTTCTGACTTGGTACAGTTTAAGGGCAACCTCTCAAGAAGTAAGGATTGTGAAAATATACATCGATACATTTCTTGAAGATCCAGCATCTCTTGCAGAGCAGCTTGTGGACACCTTTTCAGAATGCATATCAAGCAAGAAAACTTCAATGGTGAAAGCTGGATTCTGCATGAAGCTTTGGCACTGA 2232 0.4283 MAADLSCEGVALDPSKCSMLSMDEKRELVYEISKSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLKIVSEKKSEGHGTDSELHSSAAHGQQCAKRQRKIENPSRLPVPANNISAINDGDMGIASYCKNSACKAILNQADVFCKRCSCCICHQYDDNKDPSLWLICSSESPFPGVSCGLSCHLECALKHNGSGIGKISERLKLDGGFYCVSCGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRLLQGTEIYQELHEIVDEVVKKLEPEVGPLTGSPAKIGRGIVNRLSSGPEVQKLCGLAVESLDSLLSKRILPSPPAPTIQGGDSAPLQFPLLLCANMLGPNMLRFEDVTATSLTVILGSEGPSRENIAGYTLWHRKVDDVDYPVEPTCTSLLPNRRFSIKGLTPAREYIFKVVSNDLRELGMCEVHISTEHGEDEVPICSATERSQSPATNCSSLSNPSSVEDETNNSNPYSDQTGNQANHYHTFYKDSGQLASGNLSNDAMNCSNNIVGVGPPTDADSLSDKQHAAGTAGSIPAPDVLKLENKHSREEQVTEDMSIDDGLNSPIQTGKECVPLVGTSEGGLPNTPCKLEILKDGPGRNGRSKSGGKDLENGSGKREGPQDGSTSKKGSGERQDEGCTDRDFEYYVKVIRYLECEGHIEKNFRQKFLTWYSLRATSQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKKTSMVKAGFCMKLWH 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1115 743 MobiDBLite consensus disorder prediction 611 632 - -
Lal7g1115 743 MobiDBLite consensus disorder prediction 460 498 - -
Lal7g1115 743 CDD PHD_VIN3_plant 158 223 - -
Lal7g1115 743 MobiDBLite consensus disorder prediction 562 581 - -
Lal7g1115 743 CDD FN3 357 430 IPR003961 GO:0005515
Lal7g1115 743 SUPERFAMILY Fibronectin type III 357 431 IPR036116 GO:0005515
Lal7g1115 743 Pfam PHD - plant homeodomain finger protein 138 257 IPR032881 -
Lal7g1115 743 MobiDBLite consensus disorder prediction 600 653 - -
Lal7g1115 743 MobiDBLite consensus disorder prediction 530 555 - -
Lal7g1115 743 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 743 IPR044514 GO:0010048|GO:0040029
Lal7g1115 743 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1115 Lal-Chr7 17103299 17108185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1115 4 484 PHD Gene Family AT4G30200 56.375 1.74e-169 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1115 - - gmx:100794721 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1115 7 17103299 17108185 Lal7g1115 7 17103299 17108185 ECH
Lal14g1705 14 17197214 17201669 Lal7g1115 7 17103299 17108185 LSH