Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1111 ATGAAGTATATTGGGGCCAACGGTTTTAAGAAGCTTTTTTCCTTGAGAAAATGGGGTTTAGGTGAACAAGTTCTGAGCTCCAACGGTGAAGAAAACAATGAGAGCTTGAAGATTGTTCAACACGAAGTTCATGATGAAGAACATTCTCAAAGACCTACTTGGAAATGCTTCTCTTATGAAGAATTGTTTGATGCTACCATTGGCTTCAGTGAAGAAAATATGGTTGGAAAAGGAGGGTATGCAGAGGTTTACAAGGGAACACTGAAAGATGGTGAAGAAATTGCAGTGAAGAGGTTAACAAAAACTTCAAGGGATGAGAGAAAGGAGAAAGAGTTTTTGACAGAGATTGGTACAATAGGACATGTTTTCCATCCCAATGTGTTGTCTCTTATGGGTTGTTGTATGGATAATGGCCTTTACCTTGTTTTTGAGCTATCCTCTAGAGGCTCTATTGCATCTCTTCTTCATGATGAAAAATTGCCTCCAGTGGATTGGAAAACAAGGCATAAGATAGCTGTTGGGACTGCACATGGCCTCCACTACTTGCACAAAGGTTGCAAGAGGAGGATAATCCATAGGGACATCAAGGCTTCAAACATTCTATTGACATTAGATTTTGAACCAAAGATATCTGATTTTGGACTTGCAAAATGGCTTCCATCTCAATGGACTCATCATTCAATTGCCCCTATAGAAGGGACATTTGGACATTTAGCACCTGAGTACTATTTGCATGGAATGGTGGATGAGAAAACAGATTTATTTGCCTTTGGTGTGTTTTTGCTAGAAGTTATCTCTGGAAGGAAACCAGTGGATAGTTCTCACCAAAGCTTACATAGCTGGGCTAAACCAATATTGAAAAAAGGAGAGATAGAAAAGCTGGTAGATCCAAGGCTTGAAGGGGACTATGATGTAACACAGTTAAAAAGACTTGCTTTTGCTGCTTCTCTGTGCATCAGGGCATCTTCAAAATGGAGACCTATCATGACTGAGGTATTAGAGGTAATGGAGGAGGAAGAGATGGATAAGGAGAAGTGGAAAATGGCAGAGGAAGAAGAAGAACAAGAAGAGGAGTTTTGGGGTATTGAGGATCTGGAATATGAATATGAATATGAATATGATAGTTCATTTTCAATGTCTCTACCAGATTCCATTGGAAGTACTTAG 1167 0.395 MKYIGANGFKKLFSLRKWGLGEQVLSSNGEENNESLKIVQHEVHDEEHSQRPTWKCFSYEELFDATIGFSEENMVGKGGYAEVYKGTLKDGEEIAVKRLTKTSRDERKEKEFLTEIGTIGHVFHPNVLSLMGCCMDNGLYLVFELSSRGSIASLLHDEKLPPVDWKTRHKIAVGTAHGLHYLHKGCKRRIIHRDIKASNILLTLDFEPKISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGMVDEKTDLFAFGVFLLEVISGRKPVDSSHQSLHSWAKPILKKGEIEKLVDPRLEGDYDVTQLKRLAFAASLCIRASSKWRPIMTEVLEVMEEEEMDKEKWKMAEEEEEQEEEFWGIEDLEYEYEYEYDSSFSMSLPDSIGST 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1111 388 ProSiteProfiles Protein kinase domain profile. 69 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1111 388 SMART serkin_6 69 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1111 388 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Lal7g1111 388 PANTHER OS08G0249100 PROTEIN 40 366 - -
Lal7g1111 388 SUPERFAMILY Protein kinase-like (PK-like) 50 336 IPR011009 -
Lal7g1111 388 Coils Coil 336 356 - -
Lal7g1111 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lal7g1111 388 Pfam Protein kinase domain 70 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1111 388 PANTHER OS04G0654600 PROTEIN 40 366 - -
Lal7g1111 388 Gene3D Phosphorylase Kinase; domain 1 38 145 - -
Lal7g1111 388 Gene3D Transferase(Phosphotransferase) domain 1 147 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1111 Lal-Chr7 17078292 17081626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1111 55 375 Receptor kinase-like Gene Family AT4G33430 41.056 2.91e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal7g1111 Pkinase 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1111 - - gmx:100305398 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1111 7 17078292 17081626 Lal7g1111 7 17078292 17081626 ECH
Lal14g1704 14 17186149 17190616 Lal7g1111 7 17078292 17081626 LSH