Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1108 ATGGCAACTGGTGACAAAAAGGCGATCAGTCTTGAAGAAATCAAGAACGAGACTGTTGATTTGGAACGTATTCCTATTGATGAGGTGTTTGAGCAATTGAAATGTACCAAAGAAGGTTTGTCCTCGGATGAAGGAGCCAATAGGCTTCAAATATTTGGGCCAAACAAGCTAGAGGAGAAAAAGGAAAGCAAATTACTCAAGTTTCTTGGGTTCATGTGGAATCCCCTGTCATGGGTTATGGAAGCTGCAGCAATTATGGCAATTGCTCTTGCAAATGGTGATGGGAGGCCCCCAGATTGGCAAGATTTTGTTGGTATTGTTTGCTTGTTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAATAATGCTGGGAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCCAAAACCAAGGCAAGGGCTGGGGTAAGAGAAGTGCACTTCTTGCCATTCAATCCCGTTGACAAGAGAACTGCTTTGACATACATTGACGCCGATGGAAATTGGCATCGGGCGAGCAAAGGTGCTCCCGAGCAGATCATCACCCTGTGTAACCTTAGGGAAGATGTTACAAAGAAGGCTCATGCTATTATTGACAAGTTTGCAGAGAGAGGGTTACGTTCACTCGCTGTTGCTAGACAGGAAGTTCCTGAGAAAACAAAAGAAAGTGCTGGTGGTACATGGCAATTTGTTGGTTTGTTGCCACTGTTTGACCCCCCGAGACATGACAGTGCTGAAACTATTCGTAGAGCTCTAAATCTTGGTGTAAATGTGAAGATGATTACAGGTGATCAACTTGCCATAGCTAAGGAGACAGGCCGAAGACTTGGGATGGGAACAAATATGTACCCATCTGCTTCCTTGCTTGGCCAAGACAAAGATGCAAGTATTGCTGCACTTCCAGTTGAAGAGCTGATTGAGAAGGCAGATGGATTTGCTGGAGTATTTCCAGAGCATAAATATGAAATTGTAAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGAATGACTGGAGATGGTGTCAATGATGCTCCTGCTTTGAAAAAGGCTGATATTGGAATTGCTGTTGCTGATGCTACTGATGCTGCAAGAGGTGCTTCTGATATTGTCTTGACAGAACCTGGATTGAGTGTTATTATTAGTGCAGTCTTAACTAGCAGAGCAATTTTCCAAAGGATGAAGAACTACACGATCTATGCAGTATCCATCACTATCCGTATAGTGTTTGGCTTCATGTTCATTGCATTGATCTGGAAATTCGACTTCTCTCCTTTCATGGTTTTGATTATTGCCATTCTTAATGACGGAACAATCATGACAATTTCAAAGGATAGGGTGAAGCCATCTCCCTTGCCTGATAGCTGGAAACTACAAGAAATATTTGCTACTGGGATTGTTCTTGGAAGTTACTTGGCACTGATGACTGTCATATTTTTCTGGGCAATGAAAGAAAATACTTTCTTCCCCGACAAATTTAATGTTAGGCACCTAACTCACGAGGAAATGATGTCTGCTTTGTATCTACAAGTCAGTATAGTTAGCCAAGCTCTGATATTTGTAACCCGTTCTCGTAGCTGGTCTTTTCTTGAACGCCCTGGATTTCTATTAGTTGGTGCTTTCCTTATTGCTCAGCTAATTGCTACACTCATAGCAGTATATGCTGACTGGGGCTTTGCAAAGGTCAAAGGAATTGGATGGGGTTGGGCAGGAGTCATATGGCTCTACAGTATTGTCTTTTATTTTCCTCTTGACATAATGAAGTTTGCCATTCGTTACATATTGAGTGGCAAGGCTTGGGTAAACATGCTTGAAAATAAGACTGCATTCACCACCAAGAAAGACTATGGTAAAGAGGAGAGGGAAGCTCAATGGGCTTTAGCTCAGAGAACCTTGCATGGACTTCAGCCACCAGAATCTTCTAATATTTTCAATGAAAAGAGCAGTTATAGAGAACTCACTGAGATTGCTGATCAAGCCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGCGAGCTTCACACTCTTAAGGGACACGTTGAGTCTGTGGTGAAGCTGAAAGGTTTGGACATTGATACAATCCAGCAGCACTACACTGTGTGA 2103 0.428 MATGDKKAISLEEIKNETVDLERIPIDEVFEQLKCTKEGLSSDEGANRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGDGRPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKARAGVREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQIITLCNLREDVTKKAHAIIDKFAERGLRSLAVARQEVPEKTKESAGGTWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLQEIFATGIVLGSYLALMTVIFFWAMKENTFFPDKFNVRHLTHEEMMSALYLQVSIVSQALIFVTRSRSWSFLERPGFLLVGAFLIAQLIATLIAVYADWGFAKVKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYILSGKAWVNMLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPESSNIFNEKSSYRELTEIADQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1108 700 SMART Cation_ATPase_N_a_2 20 92 IPR004014 -
Lal7g1108 700 Gene3D - 106 235 IPR023299 GO:0000166
Lal7g1108 700 Pfam haloacid dehalogenase-like hydrolase 171 353 - -
Lal7g1108 700 PANTHER PLASMA MEMBRANE ATPASE 140 680 - -
Lal7g1108 700 PANTHER PLASMA MEMBRANE ATPASE 6 140 - -
Lal7g1108 700 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 596 IPR023298 -
Lal7g1108 700 Pfam Cation transporter/ATPase, N-terminus 24 86 IPR004014 -
Lal7g1108 700 PRINTS H+-transporting ATPase (proton pump) signature 196 214 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1108 700 PRINTS H+-transporting ATPase (proton pump) signature 311 327 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1108 700 PRINTS H+-transporting ATPase (proton pump) signature 339 355 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1108 700 PRINTS H+-transporting ATPase (proton pump) signature 370 395 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1108 700 PRINTS H+-transporting ATPase (proton pump) signature 509 530 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1108 700 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 314 428 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1108 700 SUPERFAMILY HAD-like 164 386 IPR036412 -
Lal7g1108 700 Gene3D - 340 595 - -
Lal7g1108 700 PANTHER CALCIUM-TRANSPORTING ATPASE 6 140 - -
Lal7g1108 700 PANTHER CALCIUM-TRANSPORTING ATPASE 140 680 - -
Lal7g1108 700 Coils Coil 651 671 - -
Lal7g1108 700 PRINTS P-type cation-transporting ATPase superfamily signature 234 245 - -
Lal7g1108 700 PRINTS P-type cation-transporting ATPase superfamily signature 256 266 - -
Lal7g1108 700 PRINTS P-type cation-transporting ATPase superfamily signature 339 358 - -
Lal7g1108 700 PRINTS P-type cation-transporting ATPase superfamily signature 362 374 - -
Lal7g1108 700 Gene3D - 649 700 - -
Lal7g1108 700 Gene3D - 236 301 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1108 Lal-Chr7 17050746 17058690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1108 104 700 Primary Pumps ATPases AT2G24520 79.967 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1108 K01535 - gmx:100816905 1050.43