Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1098 ATGTCTTCTCCATGTTTAAGTGGTGGTGGTGGAAGAACATATGGGTTAGATTTGGAATTTCTCAAATCAGCTTCATTCTCAGTATATTCTTCTTCATCTTCACCATCCTCAACAATCTCAGAATCAAGCAATTCACCTTTAACAATCTCAACTAAAAAACCTAGAACCCAAAGAAAGAGACCCAATCAAACCTACAATGAAGCTTCAGCACTTCTTTCCACTGCATACCCAAACCTCTTTCCTTCAAAAACCCTCAAAACACAACCACCACCAAGTATATTTTTTGAGGAACCTCCTTCAGAGGAGATACTATTACCTTTCAGGGTTTTCGATAACTCTTCTTCCTTTTTGATTCATCAACATAATAAGCCTAGTTTTTCAATGGAACCTAAAGTGCTCACGTTGCAAGAGAAACCGTGTCAGAGTCCGGGTGAGATAAATTCGGCTTCTGCGATGATTAATTCGATTGAATTGGAGGAAGATTGTGGTGATGATTTCGATGCGGAATCAATTCTCGATGAGGAAATTGGAGAGGGGATTGATAGTATCATGGGGAGTGTGGTGCAGCAAGAAGATACAAACGGCGCCGTTTCGTGTTTAGGGATTCCGGCGGTTGGTTTTGGAGGGAAATTGGATTGCAGGTTAGGGTTACGAAGGGCTCTCCGACACGTCGATGATGGTGGAAACTTGTGGAATTTGCCGGCGGTTGATATACTTCAAATTTTGCCTAAGATTGTTAACAAACCACCACCAACGCCGGCGTCGCCGGAGAAGAAGAAGAAAAAGAAGAAGGTGGAGGTGAAGAACCCAGAACCGGTGAAGGAAAACCCTGTGGCGAAATCGAATCCGGGATTGATGTTGAAATTGAATTACGAGGCGGTGAAGAATGCTTGGTCCGATAAGGTATCACCGTTCGCCGATGATAGCCCGGTTTCCGATGTATCGGGAAATGACGCCACAGCTCGGTTATCTCAAATAGAATTGTTATGGGACAATGGAGGAGTAAGAGAAGCAAGTGTTCTACGCTATAAGGAAAAACGGCGTACTCGTCTCTTCTCAAAGAAGATCAGATACCAAGTCAGAAAGGTTAATGCTGATCAACGCCCCAGAATGAAGGGGCGATTTGTTACGAGACCGAATTCTAGCCCAAGTGCTCTCAGATGA 1164 0.4381 MSSPCLSGGGGRTYGLDLEFLKSASFSVYSSSSSPSSTISESSNSPLTISTKKPRTQRKRPNQTYNEASALLSTAYPNLFPSKTLKTQPPPSIFFEEPPSEEILLPFRVFDNSSSFLIHQHNKPSFSMEPKVLTLQEKPCQSPGEINSASAMINSIELEEDCGDDFDAESILDEEIGEGIDSIMGSVVQQEDTNGAVSCLGIPAVGFGGKLDCRLGLRRALRHVDDGGNLWNLPAVDILQILPKIVNKPPPTPASPEKKKKKKKVEVKNPEPVKENPVAKSNPGLMLKLNYEAVKNAWSDKVSPFADDSPVSDVSGNDATARLSQIELLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADQRPRMKGRFVTRPNSSPSALR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1098 387 Pfam CCT motif 336 378 IPR010402 GO:0005515
Lal7g1098 387 MobiDBLite consensus disorder prediction 254 273 - -
Lal7g1098 387 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 382 - -
Lal7g1098 387 MobiDBLite consensus disorder prediction 28 52 - -
Lal7g1098 387 MobiDBLite consensus disorder prediction 246 279 - -
Lal7g1098 387 MobiDBLite consensus disorder prediction 28 63 - -
Lal7g1098 387 ProSiteProfiles CCT domain profile. 336 378 IPR010402 GO:0005515
Lal7g1098 387 PANTHER OS02G0148000 PROTEIN 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1098 Lal-Chr7 16976543 16980270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1098 285 378 C2C2-CO-like Transcription Factor Family AT1G73870 47.748 2.78e-20 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal7g1098 CCT 1.7e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1098 - - aprc:113845796 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1098 7 16976543 16980270 Lal7g1098 7 16976543 16980270 ECH
Lal14g1691 14 17096205 17101916 Lal7g1098 7 16976543 16980270 LSH
Lal7g1098 7 16976543 16980270 Lal19g1240 19 15654874 15658765 LSH