Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1089 ATGAAATTGCTTGAGAGAATAGACTTAGAAGAAGCAGCTTCTGCTGGCATGAAGGGAATAAATCATCTCCTTCAACTCATGTCCTCTTCTGATGATCAAAACAATGTAAAATCCAACCACCTTGATTGCACTGAAATCACTGAATTCACTGTCTCCAAATTCAAGCAGGTTATTAACTTGCTGAATGCTAATTTACCAAAATCACAAACTTCACCACCTTCTGGCCATGCTCGTTTTCGCCGCACACCTTCTATCCCTTCTCCATCTCCATCTGAACATGAAGAATTGAACGTTATCAACCATCAAACCCAAACTGAGTCAATGACTCTTCATTATACCAATCCTGTCATTGTTGACACTTATTCAAACCCATGCACTGAGTTGGTAACTGTTCCTCAAATCTCTAGTCCCAATGATATTTCCCCTACAATATCTATGGCTGGAGACAGAAGCGTTCCTGATACCAACATGGACCTCTCCATTATCATCGCGGCGCAACCTATTTCAGCCGCTAAGCCTATTCCTCTACCTTCATCTCGTGGGAAAAGGGGTCCCAGGGATACCCATTCTGATGACTGCCCTTGCTCCAAAACAAGGGTTCAACCGGGTATAGTAAGGACTATTCGGGCGAAGATTGGAGATATTGCTGATAGTTATTCATGGAGGAAGTATGGTCAAAAGTACATTAAGGGAGCACCATATCCGCGGTGTAGTAGTGTGAAAGGATGTCCAGCAAGGAAGCGTGTTGAAAGAGACGAAGAAGATATCAATATCCTTGTTATTAACTACCATGGAGATCATTGTCACCCCAATACCTAA 819 0.4261 MKLLERIDLEEAASAGMKGINHLLQLMSSSDDQNNVKSNHLDCTEITEFTVSKFKQVINLLNANLPKSQTSPPSGHARFRRTPSIPSPSPSEHEELNVINHQTQTESMTLHYTNPVIVDTYSNPCTELVTVPQISSPNDISPTISMAGDRSVPDTNMDLSIIIAAQPISAAKPIPLPSSRGKRGPRDTHSDDCPCSKTRVQPGIVRTIRAKIGDIADSYSWRKYGQKYIKGAPYPRCSSVKGCPARKRVERDEEDINILVINYHGDHCHPNT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1089 272 MobiDBLite consensus disorder prediction 65 94 - -
Lal7g1089 272 Pfam WRKY DNA -binding domain 217 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal7g1089 272 ProSiteProfiles WRKY domain profile. 210 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal7g1089 272 SUPERFAMILY WRKY DNA-binding domain 211 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal7g1089 272 SMART WRKY_cls 215 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal7g1089 272 MobiDBLite consensus disorder prediction 172 196 - -
Lal7g1089 272 Gene3D WRKY domain 202 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal7g1089 272 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 270 - -
Lal7g1089 272 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 270 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1089 Lal-Chr7 16872578 16873626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1089 2 269 WRKY Transcription Factor Family AT2G24570 35.161 4.83e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal7g1089 WRKY 2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1089 - - lang:109325740 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1089 7 16872578 16873626 Lal7g1089 7 16872578 16873626 ECH
Lal15g0176 15 1228169 1229829 Lal7g1089 7 16872578 16873626 PCT
Lal7g1089 7 16872578 16873626 Lal21g1214 21 15121742 15123989 PCT
Lal7g1089 7 16872578 16873626 Lal4g1555 4 19748765 19752627 PCT
Lal21g1214 21 15121742 15123989 Lal7g1089 7 16872578 16873626 PCT
Lal4g1555 4 19748765 19752627 Lal7g1089 7 16872578 16873626 PCT