Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1086 ATGGAAGATGATGAGGAATGCATCACAGGACTTTGTCTGGGACTTGGAATTGGAGGGTATGTGGCTAAGAAAGATGAGAAGCAAAGAGTGAAAAAGTCTGTGGAACTAGCCTTTGAACTTTGTCCTAAAGGGGAAGCCAATAACGTTAGTCATGATAACACTGAAGACAGGAACCGATGCACAAAGAAACTGAGACTCACAAAGGAGCAATCAACCATGCTTGAGAGTACCTTCAAGCTACATAGCACTCTAAATCCAGCCCAGAAAAAAGCACTTGCTGACCAATTGAATTTAAAGGCTAGACAAATTGAGGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGCTGAAGCAGACAGAAGTGGATTGTGAATTATTGAAAAAAAAGTGTCAAAATCTAAGCGATGAGAACAAAAGATTGAAGAAGGAACTGCATGAACTACGTGCACTAGAAGTTGGATCATCGCCATTATACATTCAACTATCTAAAGCTGCAACTCTGACTATGTGTTCATCGTGCCAGGAACTATTTAAGTTCAATGAAGGAACATGA 552 0.404 MEDDEECITGLCLGLGIGGYVAKKDEKQRVKKSVELAFELCPKGEANNVSHDNTEDRNRCTKKLRLTKEQSTMLESTFKLHSTLNPAQKKALADQLNLKARQIEVWFQNRRARTKLKQTEVDCELLKKKCQNLSDENKRLKKELHELRALEVGSSPLYIQLSKAATLTMCSSCQELFKFNEGT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1086 183 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 51 175 - -
Lal7g1086 183 SMART HOX_1 59 121 IPR001356 GO:0003677
Lal7g1086 183 CDD homeodomain 62 118 IPR001356 GO:0003677
Lal7g1086 183 SMART halz 117 160 IPR003106 GO:0006355|GO:0043565
Lal7g1086 183 ProSiteProfiles 'Homeobox' domain profile. 57 117 IPR001356 GO:0003677
Lal7g1086 183 ProSitePatterns 'Homeobox' domain signature. 92 115 IPR017970 GO:0000981|GO:0006355
Lal7g1086 183 Gene3D - 54 113 - -
Lal7g1086 183 PANTHER - 51 175 - -
Lal7g1086 183 SUPERFAMILY Homeodomain-like 46 118 IPR009057 -
Lal7g1086 183 Pfam Homeobox associated leucine zipper 117 150 IPR003106 GO:0006355|GO:0043565
Lal7g1086 183 Coils Coil 109 150 - -
Lal7g1086 183 Pfam Homeodomain 62 115 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1086 Lal-Chr7 16854945 16856203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1086 51 176 Homeobox Transcription Factor Family AT4G37790 66.667 5.58e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal7g1086 Homeodomain 5.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1086 K09338 - lang:109339930 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1086 7 16854945 16856203 Lal17g1550 17 16902530 16904278 PCT
Lal7g1086 7 16854945 16856203 Lal4g1552 4 19728752 19729954 PCT
Lal17g1550 17 16902530 16904278 Lal7g1086 7 16854945 16856203 PCT
Lal4g1552 4 19728752 19729954 Lal7g1086 7 16854945 16856203 PCT