Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1067 ATGGAACCTCGTGTTGGTAATAAGTTTCGGTTGGGACGGAAAATCGGTAGTGGTTCATTTGGAGAGATTTATTTAGGTATTAATATTCAGACCAATGAAGAAGTTGCAATTAAGCTTGAAAATGTCAAGACGAAGCATCCTCAGTTGCTGTACGAGTCCAAGCTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTTTTTAACTTCTGCAGTAGAAAGCTATCACTAAAGACCGTCCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTATTCATTCTAAATCATTTCTGCACCGGGATATCAAACCAGATAACTTTTTAATGGGATTAGGAAGACGCGCAAACCAGGTTTATGCTATTGATTTTGGCTTGGCTAAGAAATATAGAGATAGTTCAACCCACCAACACATTCCTTACAGGGAAAATAAAAATCTGACTGGGACCGCAAGATATGCTAGCATAAATACTCACCTTGGCATTGAGCAAAGCCGAAGAGATGATTTAGAGTCTCTTGGATATGTTTTAATGTACTTCCTAAGAGGAAGCCTTCCTTGGCAGGGACTAAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAGAAAAAGGTTTCTACCTCGATTGAAGCCTTGTGTAGAAGCTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGCTCACTAAGGTTTGATGATAAGCCAGCCTATGATTATCTCAAAAGGACATTTCGCGAACTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACCATATTGAAATATCAACAATCACAGCTTGCCACTCCTCCAGCACGGGCCATTGGTCCTGGCGCTGGAACCAGTTCCGGAATTCCACCAGCTGTTAATAATGCTGATAGACAGACAGGAGGGGAAGAAGGTCGACCTCCTCCTGGTTTGGTGTCAGTGGATTCCTCGAGGCAAAGAATGCCTTTGCCAGTCTTAAATTCTGTAGGTTTCTCTATCCAGAAAAATCCATTATCAAGTGCCAATTTCCTGGGCCAATCAAGTGGATCATCAAGGCGAGTTGCTGCTTCTAGTATCCGTGACACATTTGTTAGTGCTGAGTCGGATATTCTTGCTCATACAGCTAGTCCTGGAGCAACACAGAGATTTTTGAGTGGGCAAAGAAGTTCACCAATCGGTTCTTCTGATCCTACTAGAGTGTCAGCTGTGAGAAATACTCATCATGTCAAGAATTATGATACTGCACTCAGGGGCATGGAGAGTTTGCAGTTAGAGAATGATGAGAGGACCCATTATTAA 1386 0.4185 MEPRVGNKFRLGRKIGSGSFGEIYLGINIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRSYPTEFASYFHYCRSLRFDDKPAYDYLKRTFRELFIREGFQFDYVFDWTILKYQQSQLATPPARAIGPGAGTSSGIPPAVNNADRQTGGEEGRPPPGLVSVDSSRQRMPLPVLNSVGFSIQKNPLSSANFLGQSSGSSRRVAASSIRDTFVSAESDILAHTASPGATQRFLSGQRSSPIGSSDPTRVSAVRNTHHVKNYDTALRGMESLQLENDERTHY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1067 461 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lal7g1067 461 MobiDBLite consensus disorder prediction 304 346 - -
Lal7g1067 461 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1067 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lal7g1067 461 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 443 IPR030509 GO:0004672|GO:0005524
Lal7g1067 461 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Lal7g1067 461 PANTHER CASEIN KINASE-RELATED 1 443 - -
Lal7g1067 461 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1067 461 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Lal7g1067 461 MobiDBLite consensus disorder prediction 406 430 - -
Lal7g1067 461 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1067 461 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1067 Lal-Chr7 16743870 16751931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1067 7 223 EF-hand Containing Proteins AT2G17890 26.222 4.88e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lal7g1067 Pkinase 6.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1067 K02218 - gmx:100785851 795.038