Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1057 ATGAATGGAAGGAACAGTTTCCCTTTTACTCCATCCCAGTGGCAAGAACTTGAGCATCAAGCTCTTATCTACAAGCACATGGCTTCAGGTGTTTCCATTCCACCTGATCTAATTTTCCCCATCAAAAGAAGCTACTTAGACTCTCCTCTTTCTTCAAGGCTTTTGCCTCACCAGCCTCAACACTTTGGGTGGAACTACTTGCAAATGGGTAGGTGCAGAAGAACTGATGGGAAGAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCATAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAAATGACACTAATGCTTCTTCAACAACACCCTCCTCAATCTTATCAATCACCAAAAACAACCCTGCACTAACCCCAACAACCACTCATGACTCTTACCACCATCAACATTCCTCTTCTTCCTATGCTGCTTCTCATCCTCAGCAACACTCTTTCCTCTACCATCATCCACCACCTTCAAGACCCTCTTCTAATGGTTTGTCTTTTCAAGATAATAACACTGCTTCCATGTTTCTTGATAATGCTTCTTGCTCTCAAAACAACACTGACTCCAGGTATATTTATGGACTGAAAGAAGAGGTTGATGAACATGCTTTCTTCACTGAACCTTCTGGGAATATGAGAAGCTTCCCTGCTTCCTCTATGGATGATTCTTGGAACCTAACACCGCTCACTATAAGTTCCTCATCCTCTTCAAAACAAAGGAACTTCTCTGGTTTAACAAATGATAATGAGTACTCTTACTTGCAACTTCAGAGCCTCAGTGACAATGCAAAACAACAACCAGAACAAGATCAGGGTTGCTATAATGATATGAAGTGTGAAAATATCATGAAACTTGGTGACAGAGAAGAACAACCACCTCAGCAAAAGACTGTACATCGTTTCTTTGATGAATGGCCTCCAAAAAGAAGAGGCTTGTGGCTTGATTTGGATGATAAATCTTCAACAACTCAACTTTCAATCTCCATTCCCACTTCTAATGATTTTGCAACTTTCAGTTCCAGAAACCAACGAGATGATTGA 1086 0.4125 MNGRNSFPFTPSQWQELEHQALIYKHMASGVSIPPDLIFPIKRSYLDSPLSSRLLPHQPQHFGWNYLQMGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTNDTNASSTTPSSILSITKNNPALTPTTTHDSYHHQHSSSSYAASHPQQHSFLYHHPPPSRPSSNGLSFQDNNTASMFLDNASCSQNNTDSRYIYGLKEEVDEHAFFTEPSGNMRSFPASSMDDSWNLTPLTISSSSSSKQRNFSGLTNDNEYSYLQLQSLSDNAKQQPEQDQGCYNDMKCENIMKLGDREEQPPQQKTVHRFFDEWPPKRRGLWLDLDDKSSTTQLSISIPTSNDFATFSSRNQRDD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1057 361 Pfam WRC 70 109 IPR014977 -
Lal7g1057 361 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal7g1057 361 MobiDBLite consensus disorder prediction 111 161 - -
Lal7g1057 361 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal7g1057 361 ProSiteProfiles WRC domain profile. 66 110 IPR014977 -
Lal7g1057 361 MobiDBLite consensus disorder prediction 97 185 - -
Lal7g1057 361 PANTHER GROWTH-REGULATING FACTOR 5 3 338 - -
Lal7g1057 361 PANTHER - 3 338 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal7g1057 361 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1057 Lal-Chr7 16682201 16684708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1057 8 230 GRF Transcription Factor Family AT3G13960 42.692 3.24e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal7g1057 WRC 4.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1057 - - gmx:100783524 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1057 7 16682201 16684708 Lal7g1057 7 16682201 16684708 ECH
Lal14g1655 14 16836122 16838395 Lal7g1057 7 16682201 16684708 LSH
Lal7g1057 7 16682201 16684708 Lal17g1499 17 16420127 16423296 PCT
Lal17g1499 17 16420127 16423296 Lal7g1057 7 16682201 16684708 PCT