Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1054 ATGGCAGACCCTGCAGCCATGTACAACTTCCTGAAACAACCTTCTTCTGATTCCAAACAAAACACAGTAACGAAACCACTCCACCACCCATCTTCAAATTCTTCCATTCGCACCTTCCCATGCAACTTCTGCCACCGCAAGTTCTACACTTCTCAAGCTCTCGGTGGCCACCAAAATGCTCATAAGCTTGAAAGAGCTGCTGCTAGAAGAACCAATAATAATAATATATCCTTCACACATAATAACCATGTTGCTTCTAATGCTACATTACCACCATTTCCACCTTCCTTGGATTTGAATACTTCTACTTTTCAACCTTATGCTCATTTCTTTGCTGGTCACCCTTATTGGCTTGAAATGGAACATCCTTTTCAGTTTCAGACCCATCATCACCAACATGTTGCACCAAACAACAATGTTCCTATTTCTTACCATCTTGCTGCTTCTACTTCTTCAACTTCTACCCACAATGTTTCTGCTTCTGATGCTTCTGATCATGTTAACCTTGACCTCACTCTTCGCTTTTTTGGAAGTGGAAGGGTCTCTCTTTTTTTTGTTACTAATGCTGAGAAAGGAAAGAAAATATGGGTTATTATTGATAACATGTCATAG 612 0.402 MADPAAMYNFLKQPSSDSKQNTVTKPLHHPSSNSSIRTFPCNFCHRKFYTSQALGGHQNAHKLERAAARRTNNNNISFTHNNHVASNATLPPFPPSLDLNTSTFQPYAHFFAGHPYWLEMEHPFQFQTHHHQHVAPNNNVPISYHLAASTSSTSTHNVSASDASDHVNLDLTLRFFGSGRVSLFFVTNAEKGKKIWVIIDNMS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1054 203 Gene3D Classic Zinc Finger 13 90 - -
Lal7g1054 203 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Lal7g1054 203 SUPERFAMILY beta-beta-alpha zinc fingers 37 66 IPR036236 -
Lal7g1054 203 PANTHER ZINC FINGER PROTEIN JAGGED 15 174 IPR045320 GO:0003700
Lal7g1054 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Lal7g1054 203 PANTHER OS02G0182300 PROTEIN 15 174 - -
Lal7g1054 203 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1054 Lal-Chr7 16658113 16659299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1054 29 111 C2H2 Transcription Factor Family AT5G14010 51.807 2.08e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1054 - - lang:109330395 295.049