Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1050 ATGACTGTGATGAAAATCACATGGAAATCTATCTTCCCAAGTTGTTTTAAGGGTGATAATGATTATCATTCACCAAAACCCAATAAAGTTGTGGCTTCACCTCCAAAGACAACAAAGCCTGGAGGTTCTTTAAACAGGATTTCTGTGACTGATTTGAGTTTTCCAAGTACAACACTTTCAGAAGATTTGTCCATTTCTCTAGCAGGGTCTAACCTGCATGTTTTCACACTTGCTGAGCTAAAGATTATCACACAGGGATTCTCTTCAAGTAACTTTTTAGGAGAAGGAGGATTTGGACCTGTGCATAAAGGGTTCATTGATGATAAGCTTAGGCCTGGTCTTAAGGCTCAGACTGTTGCTGTAAAGCTTTTAGACTTGGATGGATCACAGGGTCATAGAGAGTGGTTGACCGAAGTTGTGTTTCTGGGTCAATTAAGGCATCCACACCTTGTGAAATTGATTGGATATTGCTGTGAAGAGGAACACAGACTTTTGGTATATGAATATTTACCAAGAGGGAGCTTAGAGAATCAACTTTTTAGAAGATATTCAGCTTCATTGCCATGGTCAGCAAGAATGAAAATAGCTGTTGGAGCTGCAAAGGGTCTAGCTTTTTTACATGAGGCACAGAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATATTGTTAGACTCAGATTATAGTGCAAAACTCTCAGATTTTGGCTTAGCAAAAGATGGTCCTGAAGGAGATGATACTCATGTTTCAACTAGAGTTATGGGCACCCAAGGTTATGCTGCCCCTGAATATGTCATGACAGGTCATTTGACAGCAATGAGTGATGTATATAGCTTTGGAGTGGTCCTAATGGAGCTACTAACAGGTAGAAGATCAGTGGAAAAGGGTCGTCCACAAAGAGAACAGAACCTAGTGGAATGGTCCAGGCCATACTTAAATGATTCTAGGAAACTTAGCAGAATAATGGATCCAAGGCTTGAGGGTCAATATTCAGAGATAGGAGCCAAAAAAGCTGCAGCATTGGCTTATCTATGCCTCAGTCATAGGCCAAGGAGTAGGCCAACAATGACCACAGTTGTTAACACTCTTGAGCCACTTCAAGATTTTGATGATATTCCAATTGGTCCATTTGTTTACACAGTTCCAAGTGATAATGGTGAAGGGAATAAAGATGCAAAAGAAAGTGATACACCTAAGGAGAGGAAGAAAGAAAATGGTGGTCACAACCACCACCATCATCGGAGTCACCACCGCAACAATGGTCATAGGCATCATCCTCTAAAATCACCTAACACCCCAAATGATAAAAACCATAATGGTAGAAGTGTATCAACTTCACCTGATACATCCATTGCATCAGAAAGCCAAGGAAGCAAAGTTTAG 1386 0.4048 MTVMKITWKSIFPSCFKGDNDYHSPKPNKVVASPPKTTKPGGSLNRISVTDLSFPSTTLSEDLSISLAGSNLHVFTLAELKIITQGFSSSNFLGEGGFGPVHKGFIDDKLRPGLKAQTVAVKLLDLDGSQGHREWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSARMKIAVGAAKGLAFLHEAQKPVIYRDFKASNILLDSDYSAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLMELLTGRRSVEKGRPQREQNLVEWSRPYLNDSRKLSRIMDPRLEGQYSEIGAKKAAALAYLCLSHRPRSRPTMTTVVNTLEPLQDFDDIPIGPFVYTVPSDNGEGNKDAKESDTPKERKKENGGHNHHHHRSHHRNNGHRHHPLKSPNTPNDKNHNGRSVSTSPDTSIASESQGSKV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1050 461 MobiDBLite consensus disorder prediction 23 44 - -
Lal7g1050 461 Gene3D Phosphorylase Kinase; domain 1 52 169 - -
Lal7g1050 461 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 35 420 - -
Lal7g1050 461 ProSiteProfiles Protein kinase domain profile. 87 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1050 461 MobiDBLite consensus disorder prediction 388 405 - -
Lal7g1050 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lal7g1050 461 MobiDBLite consensus disorder prediction 406 426 - -
Lal7g1050 461 MobiDBLite consensus disorder prediction 378 461 - -
Lal7g1050 461 Gene3D Transferase(Phosphotransferase) domain 1 170 373 - -
Lal7g1050 461 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Lal7g1050 461 MobiDBLite consensus disorder prediction 433 461 - -
Lal7g1050 461 PANTHER OS01G0588500 PROTEIN-RELATED 35 420 - -
Lal7g1050 461 SUPERFAMILY Protein kinase-like (PK-like) 63 365 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1050 Lal-Chr7 16637408 16639756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1050 73 364 Glycoside Hydrolase AT3G07070 51.186 1.31e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal7g1050 PK_Tyr_Ser-Thr 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1050 - - gmx:100305397 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1050 7 16637408 16639756 Lal7g1050 7 16637408 16639756 ECH
Lal7g1050 7 16637408 16639756 Lal19g1193 19 15348507 15351211 LSH
Lal7g1050 7 16637408 16639756 Lal17g1494 17 16375334 16382295 PCT
Lal17g1494 17 16375334 16382295 Lal7g1050 7 16637408 16639756 PCT