Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1044 ATGTCCCTCACCGTTTCTCTCTTCAAAAACCACAATTCTATCAACTCCAATTCTCAATTTTTGTTTCCTTCTTCTTCTCTCTCTTTCTCAATTAACCGTTTTTCTTTGTTTCTTTTGAAAATGTCGAGTTCGTCGGAAATTTCTGCTGGTTCCGGTCAGAAGCCGCCGGAGAAGTTTACTTTCTCTCAGACTTGTAGTTTATTGAGCCAATACCTTAAGGAGAAGGGTACCTTCGGTGATCTTACCCTTGGCATGACATGCAATACCCAAACAATTGGGTCATCTGAGACATCTTGTCTCTCTGCAATGGACTTGTTTCCTACTAAGGAAAATAACCTGACAACTATGGATTTGCTCTCTCCACATATTGCTTATAACTCTCACTCAACAAAAGAGGTTCCAACTTTGGTCAATACAAGTGCATTTAAGTCTGTGGACAAGGAACCTAAAACATCACAATTGACAATCTTTTATGGTGGACAAGTTATTGTATATGATGATTTCCCTGCTGAAAAAGCTGAAGAGATTATGTCCTTTGCTAGAAAAGGAATCTCCCAAAACCAGAAGCCTTCAATGATTCCTAGTATCATCCCTGCTAACTTGATTCAGGACCACCCTCATCTTGCACCACCAACAACACCAATTGTTTGTGATCTACCAATTGCTAGGAAAGCCTCCCTTCATCGTTTCTTGGAGAAGAGGAAAGATAGAATTGCTGCCAAAGCTCCATACAAAGCAAGCAATGCCATGGCAGCACCTAATAAGCCAGCTGATGAATCAATGGCATGGCTAGGATTGGCTGCTAAATCAACTCTCTGA 819 0.409 MSLTVSLFKNHNSINSNSQFLFPSSSLSFSINRFSLFLLKMSSSSEISAGSGQKPPEKFTFSQTCSLLSQYLKEKGTFGDLTLGMTCNTQTIGSSETSCLSAMDLFPTKENNLTTMDLLSPHIAYNSHSTKEVPTLVNTSAFKSVDKEPKTSQLTIFYGGQVIVYDDFPAEKAEEIMSFARKGISQNQKPSMIPSIIPANLIQDHPHLAPPTTPIVCDLPIARKASLHRFLEKRKDRIAAKAPYKASNAMAAPNKPADESMAWLGLAAKSTL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1044 272 SMART tify_2 147 182 IPR010399 -
Lal7g1044 272 Pfam tify domain 148 180 IPR010399 -
Lal7g1044 272 ProSiteProfiles Tify domain profile. 147 182 IPR010399 -
Lal7g1044 272 PANTHER PROTEIN TIFY 10A 56 267 - -
Lal7g1044 272 Pfam Jas motif 220 244 IPR018467 -
Lal7g1044 272 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 56 267 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1044 Lal-Chr7 16583394 16585491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1044 41 269 Tify Gene Family AT1G19180 44.922 2.40e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal7g1044 tify 2.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1044 K13464 - gmx:100527510 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1044 7 16583394 16585491 Lal7g1044 7 16583394 16585491 ECH
Lal14g1638 14 16747697 16752164 Lal7g1044 7 16583394 16585491 LSH
Lal7g1044 7 16583394 16585491 Lal19g1186 19 15294520 15297914 LSH
Lal7g1044 7 16583394 16585491 Lal17g1483 17 16279601 16282714 PCT
Lal7g1044 7 16583394 16585491 Lal21g1182 21 14630503 14633553 PCT
Lal7g1044 7 16583394 16585491 Lal4g1510 4 19273028 19276359 PCT
Lal17g1483 17 16279601 16282714 Lal7g1044 7 16583394 16585491 PCT
Lal21g1182 21 14630503 14633553 Lal7g1044 7 16583394 16585491 PCT
Lal4g1510 4 19273028 19276359 Lal7g1044 7 16583394 16585491 PCT