Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1030 ATGGGGAGAGAAAGAGAGGATCCAAAGCAGCAACAACAAGAACAAGTAGGTTACACGGTGGAGCAACTTGTTGCCCTAAATCGGTATAATCCTGATATTCTTCCTGATCTCGAAAACCATGTCAACGACCAGGTTTCATCACAGACATACAGTCTGGATGCAAATCTGTGCCTCCTTCGCCTCTACCAGTTTGAACCCGACAAAACCAGTTCTCAGATTGTAGCCCGTATATTGGTTAAGGCCCTCATGGCAATGCCTGCTCCAGACTTTAGCCTCTGTCTCTTTTTGATCCCGGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTGGAGACTGGAAGGTTTCGCCAGTTCTGGGATGAAGCTGCTAAAAACCGTCACATTGTTGAAGCTGTGCCAGGATTTGAGCAGGCAATTCAGAACTATGCAATTCATGTCCTTTCCTTGACTTACCAAAAGGTCTCTAGAACTGTGCTTGCTGAGGCTATCAACATGGAAGGTTTATCCTTGGACAAATTTCTGGAACACCAAGTAGCGACCTCTGGTTGGGCTATTGAGAAAGGCAGCCCAGGAAGGGGTCAACTCATTGTCCTTCCTAGAAATGAATTCAATGACCCAATTTTGAAGAAAAACACTGCTGATAGTGTACCATTGGAGCACATTACTCGCATCTTCCCTATTCTTAGCTGA 711 0.4529 MGREREDPKQQQQEQVGYTVEQLVALNRYNPDILPDLENHVNDQVSSQTYSLDANLCLLRLYQFEPDKTSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKNRHIVEAVPGFEQAIQNYAIHVLSLTYQKVSRTVLAEAINMEGLSLDKFLEHQVATSGWAIEKGSPGRGQLIVLPRNEFNDPILKKNTADSVPLEHITRIFPILS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1030 236 SUPERFAMILY ARM repeat 13 138 IPR016024 -
Lal7g1030 236 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 12 235 - -
Lal7g1030 236 Gene3D ARM repeat; domain 1 10 128 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Lal7g1030 236 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 11 236 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lal7g1030 236 Pfam CSN8/PSMD8/EIF3K family 69 194 IPR033464 -
Lal7g1030 236 Gene3D - 131 235 IPR036388 -
Lal7g1030 236 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 12 235 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lal7g1030 236 SUPERFAMILY "Winged helix" DNA-binding domain 140 233 IPR036390 -
Lal7g1030 236 ProSiteProfiles PCI domain profile. 50 209 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1030 Lal-Chr7 16449125 16452465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1030 1 236 Eukaryotic Initiation Factors Gene Family AT4G33250 75.000 1.61e-127 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1030 K15028 - cpap:110812019 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1030 7 16449125 16452465 Lal7g1030 7 16449125 16452465 ECH
Lal14g1629 14 16675770 16678852 Lal7g1030 7 16449125 16452465 LSH