Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1027 ATGGCATCAAGAGGAAAAACATTTAATCAAATGATGTTCCTATCATTGTTACTAATGAGTTGTTTTGTTTTGTTGGGTCAATGTCATGAACCTCAGACTCTGGACACAGCAGGAGAAGATGATTTGTTTGGTTCAACATGTGATCAAACCCATCATTCTCAAACATGTGTTTCTCCCTTAACATCATTGGTTCCTAGTTGCAACCCATTAGATATAAAATGTGGAGTTGAAGGGGTTCTGAAGTTACTATGTAGCACAGCAATTTACAAAGAAAAATGTGAAGAGCCACTAAGTGAGTTAATTGGAAAAGAACCTAAAATCACAACCCCTAAAGACATTCTCAAAAACTATCTTAAATTTGCTGCTGATGCTGTTTCTAAGGCCTCGGACAAGAGCCGCGACTTGAAGCTTGAATCTGAACAAGAGAAAGGAGCATTTGAAGATTGCAAGGAGTTGCTTCATGATGCAAAGGAAGATTTGCATACTTCTGTGCATGAACTTGGCAAGCTTGATTTCAATATATTTTCCACAATGACTCCTGATTTTAATAGTTGGCTAAGTGCTGTTATCTCATTCCAACAAACATGTATTGATGGTTTTCCTGAAAACTCAAATTTGAAGAAAATTCTGAGTAATCACTTCAGAGATTCTAGGGAATTTGTTAGCAATGCCCTTGCCATTGTGTCTAGAGTTAACACTATTGGTATTGGAGGTGGTTTGTTTCCACATATTCCTAACTCCCCTATTGGTTCTTTGGACAATGAAAAATTTCCCAAATGGCTTCACAAAGATGATAGAAGAATATTGAAGGCTGCTGATGATAAACCTACACCTAATGTTACTGTTGCAAAAGATGACAGTGGAGACTTCAAAACCATCTCTGAAGCTTTGGAAAAAATACCTGAAAATTATGAAGGCCGTTATGTTGTTTTTGTTAAAGAAGGAGTGTATAATGAAACTGTCATAATAACAAAGAAAATGCAAAATTTAACCCTCTATGGTGATGGATCACAAAAGAGCATCATCACTGGTAGCAAAAACTTCAGGGATGGTGTCAGGACTTTCCAAACTGCAAGTTTTGTGGTACTAGGAGAGGGATTCATAGGCAAAGCAATGGGATTCAGAAACACTGCTGGACCAGAAGGACATCAAGCAGTGGCTGCTAGAGTGCAAGCAGATCGATCAGTATTCGCGAATTGTCGATTCGAGGGCTACCAAGACACTCTATACACTCAAACCCATAGACAATTCTACCGTAGTTGTGTCATTTCAGGCACGATTGATTTCATATTCGGCGACGCAGCCGTTGTGTTCCAGAATTGCATAATGAATGTTAGAAAACCATTAGACAACCAACAGAACATGGTGACAGCACAAGGGAGACTAGACAAGCAACAAACCACAGGCATTGTTCTACAAAAATGTGTGATCCAAGCTGATGAAACATTGGTTCCAGTGAAGGACCAAATAAGGAGCTACCTTGGTAGGCCTTGGAAAAATTACTCAAGGACTATTGTTATGGAATCTGAGATTGGTGATTTCATTCACCCTGATGGGTGGACACCTTGGGCTGGTGACTTTGCATTAAAAACATTGTATTATGCTGAGTTCAACAACACTGGACCTGGTGCTAACACAGATGCTAGGGTCAAGTGGCCTGGCTACAAGGTTATTAACAAAGACAAGGCTAAAAAGTTCACTGTAGGTGAATTCTTGAAAGGGTCTTGGATCCATGGGACAGGGGTACCTTCTATTCAGGGCATGTACTATTAG 1773 0.3959 MASRGKTFNQMMFLSLLLMSCFVLLGQCHEPQTLDTAGEDDLFGSTCDQTHHSQTCVSPLTSLVPSCNPLDIKCGVEGVLKLLCSTAIYKEKCEEPLSELIGKEPKITTPKDILKNYLKFAADAVSKASDKSRDLKLESEQEKGAFEDCKELLHDAKEDLHTSVHELGKLDFNIFSTMTPDFNSWLSAVISFQQTCIDGFPENSNLKKILSNHFRDSREFVSNALAIVSRVNTIGIGGGLFPHIPNSPIGSLDNEKFPKWLHKDDRRILKAADDKPTPNVTVAKDDSGDFKTISEALEKIPENYEGRYVVFVKEGVYNETVIITKKMQNLTLYGDGSQKSIITGSKNFRDGVRTFQTASFVVLGEGFIGKAMGFRNTAGPEGHQAVAARVQADRSVFANCRFEGYQDTLYTQTHRQFYRSCVISGTIDFIFGDAAVVFQNCIMNVRKPLDNQQNMVTAQGRLDKQQTTGIVLQKCVIQADETLVPVKDQIRSYLGRPWKNYSRTIVMESEIGDFIHPDGWTPWAGDFALKTLYYAEFNNTGPGANTDARVKWPGYKVINKDKAKKFTVGEFLKGSWIHGTGVPSIQGMYY 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1027 590 TIGRFAM PME_inhib: pectinesterase inhibitor domain 80 228 IPR006501 GO:0004857
Lal7g1027 590 Pfam Plant invertase/pectin methylesterase inhibitor 82 227 IPR006501 GO:0004857
Lal7g1027 590 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Lal7g1027 590 SUPERFAMILY Pectin lyase-like 277 586 IPR011050 -
Lal7g1027 590 SMART PMEI_2 75 227 IPR006501 GO:0004857
Lal7g1027 590 Gene3D - 273 588 IPR012334 -
Lal7g1027 590 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lal7g1027 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 230 IPR035513 -
Lal7g1027 590 Pfam Pectinesterase 279 574 IPR000070 GO:0030599|GO:0042545
Lal7g1027 590 PANTHER PECTINESTERASE 63 588 - -
Lal7g1027 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 232 IPR035513 -
Lal7g1027 590 CDD PMEI-like_3 82 230 - -
Lal7g1027 590 PANTHER PECTINESTERASE 63 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1027 Lal-Chr7 16426240 16428238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1027 79 589 Carbohydrate Esterase AT2G26450 51.852 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1027 - - gmx:100784679 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1027 7 16426240 16428238 Lal7g1027 7 16426240 16428238 ECH
Lal14g1622 14 16637449 16639513 Lal7g1027 7 16426240 16428238 LSH
Lal7g1027 7 16426240 16428238 Lal17g1467 17 16038618 16039696 PCT
Lal7g1027 7 16426240 16428238 Lal4g1491 4 19062626 19063327 PCT
Lal17g1467 17 16038618 16039696 Lal7g1027 7 16426240 16428238 PCT
Lal4g1491 4 19062626 19063327 Lal7g1027 7 16426240 16428238 PCT