Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal7g1027 | ATGGCATCAAGAGGAAAAACATTTAATCAAATGATGTTCCTATCATTGTTACTAATGAGTTGTTTTGTTTTGTTGGGTCAATGTCATGAACCTCAGACTCTGGACACAGCAGGAGAAGATGATTTGTTTGGTTCAACATGTGATCAAACCCATCATTCTCAAACATGTGTTTCTCCCTTAACATCATTGGTTCCTAGTTGCAACCCATTAGATATAAAATGTGGAGTTGAAGGGGTTCTGAAGTTACTATGTAGCACAGCAATTTACAAAGAAAAATGTGAAGAGCCACTAAGTGAGTTAATTGGAAAAGAACCTAAAATCACAACCCCTAAAGACATTCTCAAAAACTATCTTAAATTTGCTGCTGATGCTGTTTCTAAGGCCTCGGACAAGAGCCGCGACTTGAAGCTTGAATCTGAACAAGAGAAAGGAGCATTTGAAGATTGCAAGGAGTTGCTTCATGATGCAAAGGAAGATTTGCATACTTCTGTGCATGAACTTGGCAAGCTTGATTTCAATATATTTTCCACAATGACTCCTGATTTTAATAGTTGGCTAAGTGCTGTTATCTCATTCCAACAAACATGTATTGATGGTTTTCCTGAAAACTCAAATTTGAAGAAAATTCTGAGTAATCACTTCAGAGATTCTAGGGAATTTGTTAGCAATGCCCTTGCCATTGTGTCTAGAGTTAACACTATTGGTATTGGAGGTGGTTTGTTTCCACATATTCCTAACTCCCCTATTGGTTCTTTGGACAATGAAAAATTTCCCAAATGGCTTCACAAAGATGATAGAAGAATATTGAAGGCTGCTGATGATAAACCTACACCTAATGTTACTGTTGCAAAAGATGACAGTGGAGACTTCAAAACCATCTCTGAAGCTTTGGAAAAAATACCTGAAAATTATGAAGGCCGTTATGTTGTTTTTGTTAAAGAAGGAGTGTATAATGAAACTGTCATAATAACAAAGAAAATGCAAAATTTAACCCTCTATGGTGATGGATCACAAAAGAGCATCATCACTGGTAGCAAAAACTTCAGGGATGGTGTCAGGACTTTCCAAACTGCAAGTTTTGTGGTACTAGGAGAGGGATTCATAGGCAAAGCAATGGGATTCAGAAACACTGCTGGACCAGAAGGACATCAAGCAGTGGCTGCTAGAGTGCAAGCAGATCGATCAGTATTCGCGAATTGTCGATTCGAGGGCTACCAAGACACTCTATACACTCAAACCCATAGACAATTCTACCGTAGTTGTGTCATTTCAGGCACGATTGATTTCATATTCGGCGACGCAGCCGTTGTGTTCCAGAATTGCATAATGAATGTTAGAAAACCATTAGACAACCAACAGAACATGGTGACAGCACAAGGGAGACTAGACAAGCAACAAACCACAGGCATTGTTCTACAAAAATGTGTGATCCAAGCTGATGAAACATTGGTTCCAGTGAAGGACCAAATAAGGAGCTACCTTGGTAGGCCTTGGAAAAATTACTCAAGGACTATTGTTATGGAATCTGAGATTGGTGATTTCATTCACCCTGATGGGTGGACACCTTGGGCTGGTGACTTTGCATTAAAAACATTGTATTATGCTGAGTTCAACAACACTGGACCTGGTGCTAACACAGATGCTAGGGTCAAGTGGCCTGGCTACAAGGTTATTAACAAAGACAAGGCTAAAAAGTTCACTGTAGGTGAATTCTTGAAAGGGTCTTGGATCCATGGGACAGGGGTACCTTCTATTCAGGGCATGTACTATTAG | 1773 | 0.3959 | MASRGKTFNQMMFLSLLLMSCFVLLGQCHEPQTLDTAGEDDLFGSTCDQTHHSQTCVSPLTSLVPSCNPLDIKCGVEGVLKLLCSTAIYKEKCEEPLSELIGKEPKITTPKDILKNYLKFAADAVSKASDKSRDLKLESEQEKGAFEDCKELLHDAKEDLHTSVHELGKLDFNIFSTMTPDFNSWLSAVISFQQTCIDGFPENSNLKKILSNHFRDSREFVSNALAIVSRVNTIGIGGGLFPHIPNSPIGSLDNEKFPKWLHKDDRRILKAADDKPTPNVTVAKDDSGDFKTISEALEKIPENYEGRYVVFVKEGVYNETVIITKKMQNLTLYGDGSQKSIITGSKNFRDGVRTFQTASFVVLGEGFIGKAMGFRNTAGPEGHQAVAARVQADRSVFANCRFEGYQDTLYTQTHRQFYRSCVISGTIDFIFGDAAVVFQNCIMNVRKPLDNQQNMVTAQGRLDKQQTTGIVLQKCVIQADETLVPVKDQIRSYLGRPWKNYSRTIVMESEIGDFIHPDGWTPWAGDFALKTLYYAEFNNTGPGANTDARVKWPGYKVINKDKAKKFTVGEFLKGSWIHGTGVPSIQGMYY | 590 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal7g1027 | 590 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 80 | 228 | IPR006501 | GO:0004857 | |
| Lal7g1027 | 590 | Pfam | Plant invertase/pectin methylesterase inhibitor | 82 | 227 | IPR006501 | GO:0004857 | |
| Lal7g1027 | 590 | ProSitePatterns | Pectinesterase signature 2. | 423 | 432 | IPR033131 | - | |
| Lal7g1027 | 590 | SUPERFAMILY | Pectin lyase-like | 277 | 586 | IPR011050 | - | |
| Lal7g1027 | 590 | SMART | PMEI_2 | 75 | 227 | IPR006501 | GO:0004857 | |
| Lal7g1027 | 590 | Gene3D | - | 273 | 588 | IPR012334 | - | |
| Lal7g1027 | 590 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | - | - | |
| Lal7g1027 | 590 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 81 | 230 | IPR035513 | - | |
| Lal7g1027 | 590 | Pfam | Pectinesterase | 279 | 574 | IPR000070 | GO:0030599|GO:0042545 | |
| Lal7g1027 | 590 | PANTHER | PECTINESTERASE | 63 | 588 | - | - |
Showing 1 to 10 of 13 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal7g1027 | 7 | 16426240 | 16428238 | Lal7g1027 | 7 | 16426240 | 16428238 | ECH | |
| Lal14g1622 | 14 | 16637449 | 16639513 | Lal7g1027 | 7 | 16426240 | 16428238 | LSH | |
| Lal7g1027 | 7 | 16426240 | 16428238 | Lal17g1467 | 17 | 16038618 | 16039696 | PCT | |
| Lal7g1027 | 7 | 16426240 | 16428238 | Lal4g1491 | 4 | 19062626 | 19063327 | PCT | |
| Lal17g1467 | 17 | 16038618 | 16039696 | Lal7g1027 | 7 | 16426240 | 16428238 | PCT | |
| Lal4g1491 | 4 | 19062626 | 19063327 | Lal7g1027 | 7 | 16426240 | 16428238 | PCT |
Showing 1 to 6 of 6 entries