Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1026 ATGGCTTCACACTCTTACACTTGTTCCAAATTGCCTTTCATCACCTTCATCTTCATGCTGATGTTGCTTGTTGGATTCTTCACCCCTTTGGGTTCTAGTGCTGGTACCACTCATTTATCAGGATCAGCATGTCTTAAAGTTTCTTCTTCTGAATTTGTTGGGTCAGTGAGGGAAGTTATTGATATTTTGAAACAAGTTTCTTCCATTTTGTCCAAGTTTAGTAGTGGCTTGGGAGATTTTCGTCTTTCTCATGCTATTTCTGATTGTCTTGATTTGCTTGATTTGTCATCTGATGAACTCACTTGGTCTGAATCTGCTACACAAGATCCTAAAGGGAAGCATAACAGTACAGGAAACCTTAGTTCAGATTTAAGGACATGGTTAAGTGCTGTCCTTGCAAATCCAGAGACATGTTTGGAGGGATTTGAAGGTACCAACAGCATTGTAAAGAGTCTAGTATCTGCTGGTCTTGGTCAAGTAACCTCATTGGTGAAGCAGCTCCTAGCACAGGTGCATCCAACCACAGAGGATCATCACTTAAACAAGGACCAATTTCCTTCTTGGATAAAACCACGTGACAGACACCTTATCCAATCAAATGGTGTAGCTGTTGATGCTGTTGTGGCTATTGATGGAACTGGAAATTATACTAATGTGATGGATGCTGTGTTAGCAGCACCTGATTATAGTATGAAAAGATACGTGATATATATTAAGAAGGGTGTTTATAATGAATATGTTGAGATTAAGAAGAAGAAATGGAATATTATGATTATTGGAGATGGTATTGATGCAACTGTTATCTCTGGTAATAGGAGTTTTGTTGATGGTTGGACCACATTTCGATCCGCTACCTTTGCTGTCAGTGGAAGAGGATTCATAGCACGAGACATCACTTTCCAAAACAGTGCAGGACCAGAGAAGCATCAAGCAGTAGCACTAAGATCAGACTCAGACCTCTCAGTTTTCTACAAATGTGGCATTTTTGGTTATCAAGATAGCCTCTATACTCACACAATGCGCCAATTCTATAGAGAATGCAAAATAAGTGGCACAGTTGATTTCATATTTGGTGATGCAACTGCTGTGTTCCAAAACTGTCAAATCCTAGCAAAAAAAGGGTTGCCAAATCAAAAGAACACAATCACAGCACAAGGTAGAAAAGACCCTAATGAACCAACTGGTTTCTCAATCCAATTCAGCAACATCACTGCAGATTCTGACCTTGTACCATTTATTAACACTACACAAACATATCTAGGTAGACCATGGAAGACATATTCACGTACCATTTTCATGCAATCATATTTGAGTAGTGTGATAAGACCAGAAGGGTGGTTGGAATGGAATGGTAATTTATTTTTGGACACATTGTACTATGCTGAGTACATGAATTTTGGACCAAGTGCTGGATTAGTTAATAGAGTGAATTGGACAGGGTACCATATATTAAATGATTCTAGTGTAGCTAGTAACTTCACTGTGGCACAATTTATTGAAGGGAATCTATGGTTACCTTCCACAGGTGTCACCTTCACTGCTGGATTAAGTGCAACACTTGAACCCAAATCATCTTTCATAGATTCACAGCAACTACCAAAGAGATCAGGGATCTCAGTGATAAAAGAGAAATTAGACAAAGATTTTGAACTCATCACTGAAAGGCGTAGAAATGAGAAGAAACAAAAGACCAAGAAGAGAATCATCATTGGTGTTGTTTCTTCCATTCTCCTTGTTGGTCTCATAGGTTGTGCATTCTTTGTTGCTACCACAAAATATGGTTATGGACAGAAACAAAATGAACCTTCTTCTGAAAGCAACAATATTGCACATTCTGAAAGGGTTGTGAAGATGGTGTGTAGTTCAGCAGATTATAAGCAAAAATGTGAAGGGCCATTGAGTGAGGCAGTGAAAAAGGATCCTGCACTCACACACCCTAAGGATATTCTTAAACTATATGTTAAATTTGCTGAGGAAGAGGTTAGTAAGGCTTTTAACAAAACCAACACATTGAAGTTTGAGTCTAAAGAAGAGAAAGGTGCATTTGAAGATTGTAAGCAATTGTTTCAGGATGCTAAGGAAGATTTAGCAGCCTCTATATCAGAACTTGGCAGGAAAGATCTTAACACTCTCTTCCAAGATTCTAGGGAATTCATTAGTAACTCACTTGCCATTGTGAAAAAGGTTGGATCATTACTTTCTACATTCCAATCAATTGGTGGTCGTTTGTTGTCAGAGAATTATGATTCTTCTGTTTATTCTTTGGACAAAGAAGGTTACCCTGAATGGATTAAGCATGAGGATAGAAGGGTTTTGAAGGCTGCTGATGATAAACCTAAACCTAATGTTACTGTTGCAAAAGATGGCAGTGGAGACTTCAAAACCATCTCTGAAGCTTTGGAAAAAATGCCTGAAAAATATAAAGGACGTTATGTTGTTTTTGTTAAAGAAGGGGTGTATGATGAGACTGTCACAATAACAAAGAAAATGCAAAATATAACCCTTTACGGTGAAGGATCACAAAAAAGTATCATCACTGGTAACAAAAACTTTAGGGATGGTGTCCGTACTTTCCTAACTGCAAGTTTTGTGGTACTTGGAGAGGGATTTATAGGAAAAGCAATGGGATTTAGAAACACTGCTGGGCCAGAAGGACATCAAGCAGTGGCTGCTAGAGTGCAAGCAGATCGCGCAGTTTTCGCGAATTGTCGATTCGAGGGCTACCAAGACACTCTATACACTCAAACCCACAGACAATTCTACCGAAGTTGCATCATCACAGGCACCATTGATTTCATATTTGGTGATGCAGCTGTTGTGTTCCAGAACTGCATCATGAATGTTAGAAAACCAATGGATAACCAACAAAACATGGTAACAGCTCAAGGAAGAATGGACAAGCAACAAACTACTGGCACTGTTCTTCAAAAATGTCTTATAAAAGCTGATAACACATTGGTTCCAGTGAAGGATAAAATCAGGAGCTACCTTGGAAGGCCTTGGAAGGAATACTCAAGGACTATTGTTATGGAATCTGAGATAGAAGATTTCATTCACCCTGATGGGTGGACACCTTGGGCTGGTAACTTTGCACTAGATACATTGTATTATGCTGAGTTCAACAACACTGGACCTGGTGCTAGCACCAAAGCTAGGATCAATTGGTCTGGCTACAAGGTTATTAACAAGGAGGAAGCTACTAAGTTCTCAGTAGGTCAATTCTTGAAAGGTACTTGGGTCCAAGGCACTGGTGTACCTTCTATTCAAGGCTTGTACTACTGA 3282 0.3921 MASHSYTCSKLPFITFIFMLMLLVGFFTPLGSSAGTTHLSGSACLKVSSSEFVGSVREVIDILKQVSSILSKFSSGLGDFRLSHAISDCLDLLDLSSDELTWSESATQDPKGKHNSTGNLSSDLRTWLSAVLANPETCLEGFEGTNSIVKSLVSAGLGQVTSLVKQLLAQVHPTTEDHHLNKDQFPSWIKPRDRHLIQSNGVAVDAVVAIDGTGNYTNVMDAVLAAPDYSMKRYVIYIKKGVYNEYVEIKKKKWNIMIIGDGIDATVISGNRSFVDGWTTFRSATFAVSGRGFIARDITFQNSAGPEKHQAVALRSDSDLSVFYKCGIFGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAVFQNCQILAKKGLPNQKNTITAQGRKDPNEPTGFSIQFSNITADSDLVPFINTTQTYLGRPWKTYSRTIFMQSYLSSVIRPEGWLEWNGNLFLDTLYYAEYMNFGPSAGLVNRVNWTGYHILNDSSVASNFTVAQFIEGNLWLPSTGVTFTAGLSATLEPKSSFIDSQQLPKRSGISVIKEKLDKDFELITERRRNEKKQKTKKRIIIGVVSSILLVGLIGCAFFVATTKYGYGQKQNEPSSESNNIAHSERVVKMVCSSADYKQKCEGPLSEAVKKDPALTHPKDILKLYVKFAEEEVSKAFNKTNTLKFESKEEKGAFEDCKQLFQDAKEDLAASISELGRKDLNTLFQDSREFISNSLAIVKKVGSLLSTFQSIGGRLLSENYDSSVYSLDKEGYPEWIKHEDRRVLKAADDKPKPNVTVAKDGSGDFKTISEALEKMPEKYKGRYVVFVKEGVYDETVTITKKMQNITLYGEGSQKSIITGNKNFRDGVRTFLTASFVVLGEGFIGKAMGFRNTAGPEGHQAVAARVQADRAVFANCRFEGYQDTLYTQTHRQFYRSCIITGTIDFIFGDAAVVFQNCIMNVRKPMDNQQNMVTAQGRMDKQQTTGTVLQKCLIKADNTLVPVKDKIRSYLGRPWKEYSRTIVMESEIEDFIHPDGWTPWAGNFALDTLYYAEFNNTGPGASTKARINWSGYKVINKEEATKFSVGQFLKGTWVQGTGVPSIQGLYY 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1026 1093 Pfam Pectinesterase 782 1077 IPR000070 GO:0030599|GO:0042545
Lal7g1026 1093 Pfam Pectinesterase 205 502 IPR000070 GO:0030599|GO:0042545
Lal7g1026 1093 Pfam Plant invertase/pectin methylesterase inhibitor 61 158 IPR006501 GO:0004857
Lal7g1026 1093 Pfam Plant invertase/pectin methylesterase inhibitor 616 710 IPR006501 GO:0004857
Lal7g1026 1093 CDD PMEI-like_3 619 728 - -
Lal7g1026 1093 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 615 729 IPR035513 -
Lal7g1026 1093 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 168 IPR035513 -
Lal7g1026 1093 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Lal7g1026 1093 PANTHER PECTINESTERASE 705 1091 - -
Lal7g1026 1093 PANTHER PECTINESTERASE 83 516 - -
Lal7g1026 1093 PANTHER PECTINESTERASE 557 705 - -
Lal7g1026 1093 ProSitePatterns Pectinesterase signature 1. 230 249 IPR018040 -
Lal7g1026 1093 ProSitePatterns Pectinesterase signature 2. 926 935 IPR033131 -
Lal7g1026 1093 Gene3D - 200 516 IPR012334 -
Lal7g1026 1093 Gene3D - 776 1091 IPR012334 -
Lal7g1026 1093 SUPERFAMILY Pectin lyase-like 779 1090 IPR011050 -
Lal7g1026 1093 SMART PMEI_2 35 170 IPR006501 GO:0004857
Lal7g1026 1093 SMART PMEI_2 611 725 IPR006501 GO:0004857
Lal7g1026 1093 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Lal7g1026 1093 PANTHER PECTINESTERASE 557 705 - -
Lal7g1026 1093 PANTHER PECTINESTERASE 705 1091 - -
Lal7g1026 1093 PANTHER PECTINESTERASE 83 516 - -
Lal7g1026 1093 CDD PMEI-like_4 13 173 - -
Lal7g1026 1093 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 173 IPR035513 -
Lal7g1026 1093 Gene3D Invertase/pectin methylesterase inhibitor family protein 612 723 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1026 Lal-Chr7 16415355 16421033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1026 15 516 Carbohydrate Esterase AT3G43270 62.791 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1026 K01051 - gmx:100784679 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1026 7 16415355 16421033 Lal17g1463 17 16013949 16016973 PCT
Lal7g1026 7 16415355 16421033 Lal4g1485 4 18968679 18971798 PCT
Lal17g1463 17 16013949 16016973 Lal7g1026 7 16415355 16421033 PCT
Lal4g1485 4 18968679 18971798 Lal7g1026 7 16415355 16421033 PCT