Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1009 ATGGTGATTGTGAACCTTGGAAAGGAAGGTGGACAAAGAATGGGGGTTGGGAAATACGAGTTAGGTAGGACTCTAGGTGAGGGCAATTTCGGAAAAGTTAAGTTTGCAAGGAACAGTGATTCTGGTCAACCTTTTGCTATTAAGATTCTTGAGAAGAACAAGATTATTAACCTCAATTCCACTGATCAGATAAAAAGAGAGATAACTACCTTAAAACTCCTCAAGCATCCCAATGTTGTTAGGTTACACGAGGTCTTGGCTAGCAAAACAAAAATTTACATGGTACTTGAGTACGTGACTGGAGGGGAGCTATTTTACAAAATTGCATCCAAGGGTAAACTTTCAGAAACTGAAGGTAGAAAGTTGTTCCAACAATTGATTGATGGTGTAAGTTACTGCCACAATAAAGGTGTCTTCCACAGAGATCTCAAGCTTGAGAATGTACTTGTGGATGATAAAGGGAACATAAAGATAACAGATTTTGGACTTAGTGCGTTACCCCAACATCTTAGGGAAGATGGATTACTGCATACAAGTTGTGGAAGTCCCAATTATGTTGCACCAGAGATTCTGGCTAATAAGGGCTATGATGGTGCAACATCAGATGCATGGTCATGTGGTGTTATCTTGTATGTTATCCTAACAGGGTACCTACCTTTTGATGATAGAAATATTGCAGTTCTCTATCAAAAGATTTTTAAAGGAGATGCTCAGATACCAAAATGGCTATCACCTGGTGCCCAAAATATGATAAAGAGGATTCTTGATCCGAATCCTATAACACGGATAACAATGGCTGAGATCAAAGAAGACCCTTGGTTCAAGGAGGACTATAACCCAACAAATCCATATGAGGATGAAGAAGAGGATATAAATATTGACAATGCAACAATATCTATCATGGAAATGCCACATGAAGCAGAAGAGAGGAGTCCAAGATCACCAACTCTCATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTAACTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAAATAAGATTTATATCAAACCTTTCAGCTAAAGATCTGATAGAGAGGATTGAGGACATTGTGACAAAAATGGGATTGAGAGTCCAGAATAAAAATGGCAAACTGAAAGTGATGCTACAGAACAAGGCGCATAAAAGTCTAGGCCACCTCTCAGTTTCAACTGAGGTGTATGAAATAAGTCCATCATTGTATGTAGTAGAATTAAGGAAATGCTATGGAGATGCTTCAGTATATAGACAGTTATGCAAGAGATTATCAAATGATTTGGGTGTTCCCTCAAGTCACGGTCTAATAAGCTCAGCTCTGAAGTGA 1344 0.3884 MVIVNLGKEGGQRMGVGKYELGRTLGEGNFGKVKFARNSDSGQPFAIKILEKNKIINLNSTDQIKREITTLKLLKHPNVVRLHEVLASKTKIYMVLEYVTGGELFYKIASKGKLSETEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDDKGNIKITDFGLSALPQHLREDGLLHTSCGSPNYVAPEILANKGYDGATSDAWSCGVILYVILTGYLPFDDRNIAVLYQKIFKGDAQIPKWLSPGAQNMIKRILDPNPITRITMAEIKEDPWFKEDYNPTNPYEDEEEDINIDNATISIMEMPHEAEERSPRSPTLINAFQLIGMSSCLDLSNFFEKEDVSERKIRFISNLSAKDLIERIEDIVTKMGLRVQNKNGKLKVMLQNKAHKSLGHLSVSTEVYEISPSLYVVELRKCYGDASVYRQLCKRLSNDLGVPSSHGLISSALK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1009 447 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1009 447 SUPERFAMILY Protein kinase-like (PK-like) 17 315 IPR011009 -
Lal7g1009 447 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 443 - -
Lal7g1009 447 Gene3D Phosphorylase Kinase; domain 1 11 98 - -
Lal7g1009 447 Gene3D Transferase(Phosphotransferase) domain 1 99 301 - -
Lal7g1009 447 Gene3D Kinase associated domain 1, KA1 313 435 - -
Lal7g1009 447 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Lal7g1009 447 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1009 447 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1009 447 PANTHER SERINE/THREONINE KINASE 12 443 - -
Lal7g1009 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lal7g1009 447 Pfam NAF domain 315 373 IPR004041 GO:0007165
Lal7g1009 447 CDD CIPK_C 319 430 - -
Lal7g1009 447 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1009 Lal-Chr7 16309823 16315146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1009 82 437 CBL-interacting serine-threonine protein kinases AT3G17510 68.258 1.22e-173 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal7g1009 Pkinase 3.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1009 K07198 - gmx:100777468 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1009 7 16309823 16315146 Lal7g1009 7 16309823 16315146 ECH
Lal14g1610 14 16551489 16556892 Lal7g1009 7 16309823 16315146 LSH
Lal7g1009 7 16309823 16315146 Lal19g1157 19 15089175 15094721 LSH
Lal7g1009 7 16309823 16315146 Lal17g1454 17 15923629 15932121 PCT
Lal7g1009 7 16309823 16315146 Lal4g1455 4 18725801 18733040 PCT
Lal17g1454 17 15923629 15932121 Lal7g1009 7 16309823 16315146 PCT
Lal4g1455 4 18725801 18733040 Lal7g1009 7 16309823 16315146 PCT