Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0978 ATGCTTTATGCATTGATGAATCTGTTCTCTGTGTGTTGGAAGCCATTTCGGCGCGGTACTGATGACATTGGAGTAAGTGGAAGAGAAGGCAAACAAGGATTGCTCTGGTTTCGCGATGTCGGAAAATATGGCTCCGGCGATTTTTCAATGGCGGTGGTTCAGGCCAATCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCGCTAGGAACCTTCGTTGGAATTTACGACGGTCACGGCGGACCCGACGCTGCAAGATACACGTGCGATCACTTGTTTCGCCATTTAGCAGCAATATCAGCTGAGTCAAGCGGGGTTTTGACAGCTGAGACTATTGAAAGGGCTTACCACCAAACAGAGGATGGGTACACTGCCCTCGTGTCGGACTTATGGAGTACTCGACCTCAGATAGCAAATGCTGGATCCTGTTGTCTAGTTGGTGTGATATTTCAGCAGACACTCTTTGTTGCAAACGTTGGAGATTCCCGTGCTGTGTTAGGTAGGAAAGTTGGCAACACTGGAGGTATGGCTGCAATTCAGCTGTCTACCGAACATAATGCAAGTCTCGAGGAAATTAGGCACGAGCTTAAAGAATTACACCCTAATGATCCCCAAATTGTTGTCCTCAAGCATGGAGTGTGGAGGGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACAAGCACAGTTTAACCGGGAACCACTTGGCGCCAAATTCAGACTCCCTGAACCAATGAACATGCCTTACATGACTGCGAATCCCACTATTCTTTCTCACAGTCTTCAGCCAAATGATTCCTTTCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAAAGCAGTGGATATTGTCAACAGCAATCCACATGCGGGTAGTGCCAAGAGACTTATCAAAGCTGCCCTTCACGAAGCAGCGAGAAAAAGAGAAATGCGATATTCAGACCTTCGGAAGATTGACAAGAAGGTTCGGCGCCATTTTCATGATGATATATCTGTTATAGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCACAGTGCTAAATTCACCAATCTCAATTCGAAGTGCTCTTGATCACTGA 1116 0.4552 MLYALMNLFSVCWKPFRRGTDDIGVSGREGKQGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARYTCDHLFRHLAAISAESSGVLTAETIERAYHQTEDGYTALVSDLWSTRPQIANAGSCCLVGVIFQQTLFVANVGDSRAVLGRKVGNTGGMAAIQLSTEHNASLEEIRHELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKQAQFNREPLGAKFRLPEPMNMPYMTANPTILSHSLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLNSPISIRSALDH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0978 371 CDD PP2Cc 48 348 IPR001932 -
Lal7g0978 371 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 371 - -
Lal7g0978 371 SUPERFAMILY PP2C-like 57 349 IPR036457 -
Lal7g0978 371 Pfam Protein phosphatase 2C 71 318 IPR001932 -
Lal7g0978 371 ProSitePatterns PPM-type phosphatase domain signature. 73 81 IPR000222 GO:0043169
Lal7g0978 371 ProSiteProfiles PPM-type phosphatase domain profile. 47 348 IPR001932 -
Lal7g0978 371 SMART PP2C_4 34 346 IPR001932 -
Lal7g0978 371 Gene3D - 38 356 IPR036457 -
Lal7g0978 371 PANTHER ALPHABET, ISOFORM E-RELATED 3 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0978 Lal-Chr7 16063402 16067710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0978 1 368 PP2C-type Phosphatase Gene Family AT4G38520 58.201 1.35e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0978 K01102 - gmx:100790813 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0978 7 16063402 16067710 Lal7g0978 7 16063402 16067710 ECH
Lal7g0978 7 16063402 16067710 Lal19g1132 19 14872676 14876840 LSH
Lal7g0978 7 16063402 16067710 Lal5g1653 5 18827837 18833377 PCT
Lal7g0978 7 16063402 16067710 Lal11g0278 11 1967881 1971086 PCT
Lal5g1653 5 18827837 18833377 Lal7g0978 7 16063402 16067710 PCT
Lal11g0278 11 1967881 1971086 Lal7g0978 7 16063402 16067710 PCT