Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0975 ATGGAAACTTCACAAACAGAGGAGCTTTTGAAGAAGATCCAACAGTTAGAAGAAGGACACGCTCATCTGGAGCAAGAAATGTCAAAACTGAAGCTCTCCGGTGGTGGTGGTGGTGGTGGTGATGTAAGATCACATCGGCAGAGGTCTCACTCGGTGTCGCCGCAGCGGTTCAGGTTAGGGAGAAGAACCGATGCAGCATCGGCGGCAGCAGCAGCGTGGAATAAAGGGTCTTGTTCGTTTAAACAATCGTCGCCGTTGCAAAGAGAGAGTCGTAGTAGTAGTGAACCTCAAAATGATGATGATGGTGGTGGTGGTGTTGAATCGTGTGGGCCCTCGGCTGTGAATTTTACTGATAAACAGTATCTAAATATTTTGCAGTCAATGGGACAGAGTGTTCATATATTGGATCTTAACTCTCGTATTATATACTGGAACCGTAGTGCTGAAAAGCTATATGGTTATGCAGCAGAGGAAGCTCTTGGCCAGGATGGGATTGAGCTGATTGTAGACCCAAGTGATTTTGCCTTAGCCAATGATGTAGTGAACCATGTCATAATGGGAGAGAGCTGGACTGGGCAATTCCCCGTCAAAAATAAAATGGGAGAGAAATTTTTGGTTGCAGCAACCAATACACCTTTCTATGACGATGATGATGGAAGCTTAGTTGGCCTCATTTGTGTCTCAAGTGATTCACGTCCCTTTCTTGAAATGAGAGTTCCATTCTCAGGTGTAAGGAATGCCGGACCCAATGCAGGTTCCAACCGTCCTAGAAGTAGCATCTCCAATAAACTTGGCCTTGACACTCAACAGCCGCTTCAAGTTGCTCTAGCATCCAAAATTTCTAATTTGGCATCAAAGGTGAGTAACAAAGTTAAGTCAAGAATCAGGACAGGAGAGAATAACATGGATCGTGAAGGTGGGGGTGGAGAAAGTCAAAATTCTGAGCATAGTTACTCAGAATCTGACCAGAGAGAGGATGCTAATTCCAGTGGAGCTAGTACACCCAGAGGTGATGCGGCACTGTCCCCATTTGGTCTATTTTCTCATGTTGAAGAGAAATCCCTAGGAAAAACTTCAAGAGACTCTGGTGATGAGAGTGAAGGAAAGCCTATTCACAGAATCATTACTTCGAAGGCTGAAGCATGGATTCAAAAGAAAACACTATCGTGGCCATGGAGAGCAAATGACCGAGAAGGGTCGGAGGCAAAGAATCTTTCTTCTGGCTTGAAGCAAGAAAGCCAGGCAGGTCCTATTAACAATGAGGCTTCCGGATCCTGGTCCTCCCCCTTTAATGTTAACAGCACGAGTAGTGCCAGCAGCTGTGGGAGTGCTGGCAGTTGTGCTGTCAGCAATAAAGTGGATGTGGACACTGATTGTTTGGATTACGAAATTTTGTGGGAGGACCTGACAATTGGAGAGCAAATTGGGCAAGGTTCATGTGGAACTGTATATCATGCTCTGTGGTACGGATCAGATGTTGCAGTCAAGGTATTTTCAAAGCAAGAATATTCAGATGATGTAATAATGTCCTTCAGACAAGAGGTTTCTGTCATGAAAAGACTTAGACACCCAAATATTCTTCTCTTTATGGGGGCAGTGACTTCACCTCAACGCCTCTGCATTGTGACAGAATTTCTCCCACGTGGAAGCTTGTGTCGCTTGTTACACAGAAATACATCCAAACTTGACTGGAGACGTCGAGTTCATATGGCCTTGGATATTGCAAGAGGCATTAATTATCTTCACCATAGCAACCCACCTATAATACACAGAGATTTGAAGTCTTCAAATCTTCTAGTCGATAAGAATTGGACAGTGAAGGTTGGAGATTTTGGTCTTTCACGTCTTAAGCTCGAAACATATCTCACAACTAAGACAGGGAGGGGCACGCCTCAATGGATGGCACCGGAAGTCCTTCGTAATGAACCCTCAGATGAAAAGTCTGATGTATACAGCTTTGGGGTGATATTATGGGAGCTTGCAACTGAAAAGATTCCTTGGGAGAATCTCAATTCAATGCAGGTGATTGGAGCTGTAGGGTTCATGAACCAGCGGCTAGAAATTCCCAAAGAAGTTGATCCACGGTGGGCTTCCATAATTGAGAGCTGCTTTCATAGTGATCCAACATGCCGACCAACATTCCAGGAACTGCTTGAAAGGCTTAGGGATCTGCAAAGATGGTATGCTATTCAGTTCCAGGCAGCTCGGTCGGCTGGCGGGGAAACCATCCAAAAGGAGTCCTAG 2244 0.4514 METSQTEELLKKIQQLEEGHAHLEQEMSKLKLSGGGGGGGDVRSHRQRSHSVSPQRFRLGRRTDAASAAAAAWNKGSCSFKQSSPLQRESRSSSEPQNDDDGGGGVESCGPSAVNFTDKQYLNILQSMGQSVHILDLNSRIIYWNRSAEKLYGYAAEEALGQDGIELIVDPSDFALANDVVNHVIMGESWTGQFPVKNKMGEKFLVAATNTPFYDDDDGSLVGLICVSSDSRPFLEMRVPFSGVRNAGPNAGSNRPRSSISNKLGLDTQQPLQVALASKISNLASKVSNKVKSRIRTGENNMDREGGGGESQNSEHSYSESDQREDANSSGASTPRGDAALSPFGLFSHVEEKSLGKTSRDSGDESEGKPIHRIITSKAEAWIQKKTLSWPWRANDREGSEAKNLSSGLKQESQAGPINNEASGSWSSPFNVNSTSSASSCGSAGSCAVSNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGINYLHHSNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKLETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWENLNSMQVIGAVGFMNQRLEIPKEVDPRWASIIESCFHSDPTCRPTFQELLERLRDLQRWYAIQFQAARSAGGETIQKES 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0975 747 MobiDBLite consensus disorder prediction 290 373 - -
Lal7g0975 747 SUPERFAMILY PYP-like sensor domain (PAS domain) 121 230 IPR035965 -
Lal7g0975 747 SUPERFAMILY Protein kinase-like (PK-like) 458 721 IPR011009 -
Lal7g0975 747 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 438 744 - -
Lal7g0975 747 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 32 411 - -
Lal7g0975 747 CDD STKc_MAP3K-like 475 721 - -
Lal7g0975 747 Gene3D Transferase(Phosphotransferase) domain 1 548 731 - -
Lal7g0975 747 SMART serkin_6 469 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g0975 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Lal7g0975 747 CDD PAS 128 230 IPR000014 -
Lal7g0975 747 TIGRFAM sensory_box: PAS domain S-box protein 119 223 IPR000014 -
Lal7g0975 747 ProSiteProfiles Protein kinase domain profile. 469 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g0975 747 Pfam Protein tyrosine and serine/threonine kinase 469 721 IPR001245 GO:0004672|GO:0006468
Lal7g0975 747 PRINTS Tyrosine kinase catalytic domain signature 543 556 IPR001245 GO:0004672|GO:0006468
Lal7g0975 747 PRINTS Tyrosine kinase catalytic domain signature 582 600 IPR001245 GO:0004672|GO:0006468
Lal7g0975 747 PRINTS Tyrosine kinase catalytic domain signature 629 639 IPR001245 GO:0004672|GO:0006468
Lal7g0975 747 PRINTS Tyrosine kinase catalytic domain signature 648 670 IPR001245 GO:0004672|GO:0006468
Lal7g0975 747 PRINTS Tyrosine kinase catalytic domain signature 692 714 IPR001245 GO:0004672|GO:0006468
Lal7g0975 747 MobiDBLite consensus disorder prediction 393 426 - -
Lal7g0975 747 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Lal7g0975 747 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 438 744 - -
Lal7g0975 747 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 411 - -
Lal7g0975 747 Pfam PAS fold 120 226 IPR013767 GO:0006355
Lal7g0975 747 MobiDBLite consensus disorder prediction 18 64 - -
Lal7g0975 747 MobiDBLite consensus disorder prediction 401 426 - -
Lal7g0975 747 MobiDBLite consensus disorder prediction 353 373 - -
Lal7g0975 747 MobiDBLite consensus disorder prediction 79 110 - -
Lal7g0975 747 SMART pas_2 119 186 IPR000014 -
Lal7g0975 747 Gene3D Phosphorylase Kinase; domain 1 462 546 - -
Lal7g0975 747 Gene3D PAS domain 129 233 - -
Lal7g0975 747 Coils Coil 6 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0975 Lal-Chr7 16036513 16042883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0975 1 738 MAP Kinase Kinase Kinase AT3G06620 60.614 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal7g0975 PK_Tyr_Ser-Thr 4.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0975 - - pvu:PHAVU_003G114400g 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0975 7 16036513 16042883 Lal7g0975 7 16036513 16042883 ECH
Lal7g0975 7 16036513 16042883 Lal11g0274 11 1942956 1949524 PCT
Lal11g0274 11 1942956 1949524 Lal7g0975 7 16036513 16042883 PCT