Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0970 ATGAATATGATGGCAAATAACGTAGAGGGGAAGTTGATGGGTTCAGAGATACACGGATTCCACACATTGCAAGAGCTAGATGTGGGGAGCATTATGGGTGAAGCAAGAACGAGATGGCTTCGTCCCAATGAGATTCATGCCATACTTTGTAATTCCAAGTATTTTACCATCCATGTCAAGCCAGTGAATTTGCCGAAAAGTGGTACGTTTGTATTATTTGACCGCAAGAAGCTTAGGAACTTTCGAAAAGATGGACATAACTGGAAAAAGAAAAAAGATGGGAAAACTATTAAAGAAGCTCATGAGCACTTAAAGGTTGGTAATGAAGAAAGGATCCACGTATATTATGCACATGGCCAAGATAACACAGACTTTGTTCGTAGATGTTATTGGCTGCTTGATAAGAGTGCGGAACACATAGTCCTTGTTCATTACCGTGAAATACAGGAGGTGCAAGCTTCTCCTGTCAGTCATGTGAATTCAAACTCTAGTTCTTCTGATCCAGCTGCACCATTGATTATATCAGAAGAAATAAATTCGGGGACCAACATTGCATATGCTGGTGAGATTAATCACAATTCAGCAGTCAAAAGTCATGAACTGAGGCTTCTCGAGATAAATACACTTGAATGGGATGACCTAGTGCTTGCAAATGATCTTAACACCTCTACCGTGCCTAATGGAGGCAAAGTTCAAGATTTTGATCAACAAAATCAAGTTTTGTTGAATAACAGTTTCAACAATCCGGTAGACAGCAATCGATCTGCAGAGATTCCTTCTTTTGATTATTTAACTCAGCCAATTGCTGTGAGCAATAGTATTCCTTACAATTTTTCAGAAAGTGTTAATCTTCAGACAGTGGACAATCAAGTAAATCCAAATGAGCACAAGAACCATCCTATCTCTGCAAGTAACAATTTAGTCAATGAGAAATTGCAAAGTCAGGACAGCTTTGAAATGTGGATGAAAATCATGTCTGATTCACCGTGTTCAGTAGATGAGTCAGCTCTTGAATCCTCAGTTTCATCTGTTCACGAATCTTATTCATCTCCGGTAGTTGATAATCAGCAATCTTCTCTGCTTGAACAAGTATTTACTCTCACTGATGTGTCCCCTGCTTGGGTGCCTTCCACTGAGAAATCAAAGGTCCTGGTGACTGGATTCTTTCATAAGGACTATCAACACCTTTCCAAGACCAATCTATTGTGTGTTTGTGGTGATGTAAGTGTGGCCGTGGAAATTGTTCAGGTTGGGGTCTACAGATGCTGGGTATCACCACATTCTCCTGGATTCGTGAATCTCTATTTGAGCTTTGATGGCCATAAGCCCATTAGCCAAGTTGTTAATTTTGAGTATCGTACTACTGCTTTGCATGACCCTGCAGTTTCTATGGAACAGAAGGACGACTGGGACGAATTTCAACTTCAAATGAGGCTTGCTCATTTGCTCTTTGCTAAACAAAAGAGCCTTGATGTTTTCTCTAGTAATGTATCACCTAGTGCACTAAAGGAAGCTAGACAATTCGCCTTGAAAGCATCATACATTTCAAATAGTTGGCAATACTTGATCAAGTCAACTGAAGACAAGAAAATTCCAATTTTGCAAGCAAAAGAAGCCCTATTAGGGACTGCATTGAAAAACAGACTAAAGGACTGGCTGTTGGAAAGAATTGTTTTAGGTTGTAGGACTACCGAGTTTGATGCACAAGGCCAAAGTGTAATCCATTTGTGTGCAATTCTGGAATATACTTGGGCTGTTTCCTTATTTTTGTGGTCAGGATTGTCGCTGGATTTCCGGGATAAATTTGGATGGACAGCTCTTCATTGGGCGGCTTATTATGGAAGGGAGAAAATGGTTGCAACTCTGTTGTCTGCTGGGGCAAAGCCAAATTTGGTCACGGATCCAACTCCCCAAAATCCTGGTGGGTGTACTGCTGCTGATATTGCTTATATGAAGGGTTATGATGGCTTAGCAGGTTATCTTTCAGAAAAGTCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGGAATATTAGAGGCTCACTGAAAAGTAACATGACCGAACCAGTAGGATCTGACAACCTTACTGAGGAGCAGTTATACCTGAAAGATACATTGGCAGCGTACCAAACAGCTGCTGAGGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCACTCCCTAAAGTTGCAAATGGAGGCAGTTGAATTTTGCAGTCCAGAGGCTGAAGCGCGCATAATAGTTGCCGCAATGAAGATTCAGCATGCCTTTCGTAACTATGAGACAAGGAAAATGATGGCAGCTGCTGTTCGCATTCAGCATACATACCGTACATGGAAGACTCGTAAGGAATTTCTCAATATGCGTCGTCAGGCTATCAAAATCCAAGCCGCTTTCCGGAAATTTAAAGAGCGGAAGCATTATCGCAAAATTCTTTGGTCTGTTGGTGTGGTTGAGAAAGCAGTACTTCGCTGGCGTTTAAAGAGAAGAGGCTTACGTGGGCTCCAGGTTAATCCCGTGGAAGCAACCAGAGATGAGAAGCCGGAAAGTGATGTTGAGGAGGACTTCTTTCGGATTGGTAGGAAACAAGCTTCACAGCGTGTTGAGAGATCTGTAGTTCGTGTGCAAGCCATGTTCCGTTCTAAAAAAGCACAAGAAGAGTATAGGAGGATGAAGCTGGCACTTAATCAAGCAAAGGAATATGAAGAACTCCTCAATAGTGAAGTTGAGATGGAATGCAAGTAG 2748 0.4185 MNMMANNVEGKLMGSEIHGFHTLQELDVGSIMGEARTRWLRPNEIHAILCNSKYFTIHVKPVNLPKSGTFVLFDRKKLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGQDNTDFVRRCYWLLDKSAEHIVLVHYREIQEVQASPVSHVNSNSSSSDPAAPLIISEEINSGTNIAYAGEINHNSAVKSHELRLLEINTLEWDDLVLANDLNTSTVPNGGKVQDFDQQNQVLLNNSFNNPVDSNRSAEIPSFDYLTQPIAVSNSIPYNFSESVNLQTVDNQVNPNEHKNHPISASNNLVNEKLQSQDSFEMWMKIMSDSPCSVDESALESSVSSVHESYSSPVVDNQQSSLLEQVFTLTDVSPAWVPSTEKSKVLVTGFFHKDYQHLSKTNLLCVCGDVSVAVEIVQVGVYRCWVSPHSPGFVNLYLSFDGHKPISQVVNFEYRTTALHDPAVSMEQKDDWDEFQLQMRLAHLLFAKQKSLDVFSSNVSPSALKEARQFALKASYISNSWQYLIKSTEDKKIPILQAKEALLGTALKNRLKDWLLERIVLGCRTTEFDAQGQSVIHLCAILEYTWAVSLFLWSGLSLDFRDKFGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTPQNPGGCTAADIAYMKGYDGLAGYLSEKSLVEQFNDMSLAGNIRGSLKSNMTEPVGSDNLTEEQLYLKDTLAAYQTAAEAAARIQAAFREHSLKLQMEAVEFCSPEAEARIIVAAMKIQHAFRNYETRKMMAAAVRIQHTYRTWKTRKEFLNMRRQAIKIQAAFRKFKERKHYRKILWSVGVVEKAVLRWRLKRRGLRGLQVNPVEATRDEKPESDVEEDFFRIGRKQASQRVERSVVRVQAMFRSKKAQEEYRRMKLALNQAKEYEELLNSEVEMECK 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0970 915 ProSiteProfiles CG-1 DNA-binding domain profile. 28 154 IPR005559 GO:0003677
Lal7g0970 915 Gene3D Immunoglobulins 361 456 IPR013783 -
Lal7g0970 915 SUPERFAMILY Ankyrin repeat 543 664 IPR036770 -
Lal7g0970 915 ProSiteProfiles Ankyrin repeat region circular profile. 602 630 - -
Lal7g0970 915 ProSiteProfiles IQ motif profile. 789 813 IPR000048 GO:0005515
Lal7g0970 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 711 816 IPR027417 -
Lal7g0970 915 Pfam Ankyrin repeats (3 copies) 552 631 IPR002110 GO:0005515
Lal7g0970 915 Gene3D - 534 671 IPR036770 -
Lal7g0970 915 Pfam IQ calmodulin-binding motif 791 810 IPR000048 GO:0005515
Lal7g0970 915 Pfam IQ calmodulin-binding motif 768 786 IPR000048 GO:0005515
Lal7g0970 915 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Lal7g0970 915 ProSiteProfiles IQ motif profile. 750 776 IPR000048 GO:0005515
Lal7g0970 915 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 17 914 - -
Lal7g0970 915 ProSiteProfiles IQ motif profile. 870 898 IPR000048 GO:0005515
Lal7g0970 915 SMART CG_1_2 31 149 IPR005559 GO:0003677
Lal7g0970 915 SMART ANK_2a 641 672 IPR002110 GO:0005515
Lal7g0970 915 SMART ANK_2a 602 631 IPR002110 GO:0005515
Lal7g0970 915 Gene3D - 765 813 - -
Lal7g0970 915 SMART iq_5 868 890 IPR000048 GO:0005515
Lal7g0970 915 SMART iq_5 788 810 IPR000048 GO:0005515
Lal7g0970 915 SMART iq_5 765 787 IPR000048 GO:0005515
Lal7g0970 915 Pfam CG-1 domain 34 147 IPR005559 GO:0003677
Lal7g0970 915 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 17 914 - -
Lal7g0970 915 Coils Coil 882 905 - -
Lal7g0970 915 ProSiteProfiles IQ motif profile. 766 795 IPR000048 GO:0005515
Lal7g0970 915 SUPERFAMILY E set domains 366 453 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0970 Lal-Chr7 15987308 15996790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0970 31 900 CAMTA Transcription Factor Family AT3G16940 52.800 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lal7g0970 CG-1 1.6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0970 K21596 - gmx:100793970 1374.38