Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0965 ATGGAGTTTGATCACAGTGAAAAAGGATCAGAAGCTGAAGACTCAAACCCTAACTCTGGTAATGAACAGAAGAAGACATGCGCCGATTGCGGCACTTCCAAAACCCCTCTCTGGAGAGGTGGACCCGCAGGTCCCAAGTCACTGTGCAATGCTTGTGGAATCAGAAGCAGGAAGAAGAAAAGAGCGATTTTGGGAGTAAGTAAAGGAAACAGTGATGAAATAAGAAAAGGGAAAAGAAGTAACAGTAACAATAGGATTGGGGAAAGTTTGAAACAGAGGTTATGGAATTTGGGAAAAGAAGTAATGATGCAGAGATCTACAATGAGGATGAAATTGGGTGAAGAAGAACAAGCTGCTGTTGTTTTAATGTCTCTTTCTTATGGATCTGTTTATGCTTAA 399 0.411 MEFDHSEKGSEAEDSNPNSGNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGVSKGNSDEIRKGKRSNSNNRIGESLKQRLWNLGKEVMMQRSTMRMKLGEEEQAAVVLMSLSYGSVYA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0965 132 Pfam GATA zinc finger 27 61 IPR000679 GO:0006355|GO:0043565
Lal7g0965 132 ProSitePatterns GATA-type zinc finger domain. 27 52 IPR000679 GO:0006355|GO:0043565
Lal7g0965 132 PANTHER OS01G0976800 PROTEIN 6 132 - -
Lal7g0965 132 ProSiteProfiles GATA-type zinc finger domain profile. 21 57 IPR000679 GO:0006355|GO:0043565
Lal7g0965 132 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 64 - -
Lal7g0965 132 CDD ZnF_GATA 26 79 IPR000679 GO:0006355|GO:0043565
Lal7g0965 132 SMART GATA_3 21 80 IPR000679 GO:0006355|GO:0043565
Lal7g0965 132 MobiDBLite consensus disorder prediction 13 30 - -
Lal7g0965 132 Gene3D - 21 89 IPR013088 GO:0006355|GO:0008270
Lal7g0965 132 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0965 Lal-Chr7 15963220 15964251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0965 23 132 C2C2-Gata Transcription Factor Family AT3G06740 66.957 7.71e-47 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lal7g0965 GATA 1.2e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0965 - - aprc:113847917 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0965 7 15963220 15964251 Lal7g0965 7 15963220 15964251 ECH
Lal7g0965 7 15963220 15964251 Lal5g0167 5 1463296 1469791 ECH
Lal7g0965 7 15963220 15964251 Lal19g1123 19 14817219 14818171 LSH