Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0963 ATGGCCTGGCACTGTTATTTCATCTTAACCGTCATAACAATATTACTCGCAACGACGTCGTTTTCATATGCACAAGAATGCAATGGGGTACTTTTGTCATATTCATACACCACCGGAGAACAGTTACCACCAACCGTTTCCGACCCGGCGAAGCAACCGTACCGGTTCGAATCAACGGTAACACTTCTCAATAACGGACTCGACGAGGTTAAGTCATGGAAGGCGTTTGTAGAGTTTAAGCATAATGAGTATTTGGTCTCTGCTACTGGTGTGGTTCTCGCCGACGGCACCACTCTCCCCGCCGCCGTCGGTAACGGCACCGTTTTTGCTGGTTATCCTCAGGCTGATCTCAAGACTGCGGTGCAGACTGCCGGTGACTTGACTCAGATGCAGGTTCAGATCGACCTCGTTGGCACCGTGTTCGGGGTGGCGCCACCGGCTGTTCCGCTGCCATCTTCTATCAAACTCGCTAATGATGGATTCAAATGTGCCTCGACCAATGATCAAGGAGGTAGTGGGATTAGTGCGTGCTGTACGAAAGATCCCAAGTTTAAAACTAACATCACTATGAATGATAAGTTCACGCCGCGTCAAAGTGGTGATCTTACCATTATGTATGATGTGATTAGAACTTATGATACAAGTTACTGGGCAGAGGTTACAATTGCAAACCATAACCGCCTTGGCCGTCTTGACAACTGGAAGTTGAGCTGGGATTGGATTAATGACGAGTTCATAAATGCAATGAGGGGGGCTTATCCATCTGTTGTCGATGTTTCAGATTGTGTGTTTGGTAAGAAGGGTTCACAATATAAGGATCTTGATCTTTCCAATGTGTTGAATTGTCAAAAAAGGCCAACCATCATTGATCTTCCTCTCACAAAGTTCAATGACACAGACCTTGGGAAAATTCCCTTTTGCTGCCGGAATGGTACTATATTGCCGCCATCAATGGACCTTAGTAAGTCTGTTTCTAGATTCCATATGCAGGTCTATAAAATGCCCCCCAACCTAAATCGCTCCGATCTTTCACCACCACAGAACTGGCAAATAAATGGAACACTCAACCCTACTTACAAATGTGGCCCTCCAGTTCGTGTGAGTCCTACTCTAAATCCAGATCCATCGGGCATACCATCAAGCAAAGCTGTAATGGCCAGTTGGCAGGTTGTGTGCAACATAACTAAGGCCAAACAGATAGCAAGTAAATGTTGTGTCTCATTTTCAGCCTATTACAATGAATCAGCTATTCCATGTAAAACTTGTGCATGTGGATGCCCCAGCAACAACATAGGAAGAACGTGTAGTGCCACTAAACCAGCTATGTGGCTTCCACCAGATGCACTTCTTGTTCCTTTTGAGAACCGAAGTACCAAGGCTATAGCTTGGGCTAATTTGAAACATCGACCAGTGCCGAACCCGATGCCCTGTGGTGACAACTGTGGCGTGAGCATCAATTGGCATTTAAATACAGACTATGCTAAAGGATGGAGTGCAAGAATCACACTTTTTAATTGGGGTGATACTAATTTTGCCGACTGGTTTGCTGCAGTTCAAATGGACAAAGCAGGTCCAGGTTTTGAGAAAATGTATTCATTCAATGCAACCTCCCTACAAGGTGTAAAGAATACAATATTCATGCAAGGTTTGCCGGGATTGAACTACCTTGTAGCAGAGGTAGATGGATCTAACCCTCTGAAAGATCCCAGGGTGCCTGGTAAACAACAGTCAGTGATCTCATTCACAAAGAAACCTACTCCTGGAATCAATGTTGCTCATGGAGATGGGTTTCCTACGAAAGTCTTCTTTAATGGAGAGGAATGCTCTCTTCCTTCAGTGATTCCAAGCAGTGGTTCCAGGAAGGTTTTTTCCTGGGCTACTTCAATGCTCCTGACACTGGTGCTGATCATCTTGAAGCAGCAATAG 1926 0.4528 MAWHCYFILTVITILLATTSFSYAQECNGVLLSYSYTTGEQLPPTVSDPAKQPYRFESTVTLLNNGLDEVKSWKAFVEFKHNEYLVSATGVVLADGTTLPAAVGNGTVFAGYPQADLKTAVQTAGDLTQMQVQIDLVGTVFGVAPPAVPLPSSIKLANDGFKCASTNDQGGSGISACCTKDPKFKTNITMNDKFTPRQSGDLTIMYDVIRTYDTSYWAEVTIANHNRLGRLDNWKLSWDWINDEFINAMRGAYPSVVDVSDCVFGKKGSQYKDLDLSNVLNCQKRPTIIDLPLTKFNDTDLGKIPFCCRNGTILPPSMDLSKSVSRFHMQVYKMPPNLNRSDLSPPQNWQINGTLNPTYKCGPPVRVSPTLNPDPSGIPSSKAVMASWQVVCNITKAKQIASKCCVSFSAYYNESAIPCKTCACGCPSNNIGRTCSATKPAMWLPPDALLVPFENRSTKAIAWANLKHRPVPNPMPCGDNCGVSINWHLNTDYAKGWSARITLFNWGDTNFADWFAAVQMDKAGPGFEKMYSFNATSLQGVKNTIFMQGLPGLNYLVAEVDGSNPLKDPRVPGKQQSVISFTKKPTPGINVAHGDGFPTKVFFNGEECSLPSVIPSSGSRKVFSWATSMLLTLVLIILKQQ 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0963 641 Pfam COBRA-like protein 216 395 IPR006918 GO:0010215|GO:0031225
Lal7g0963 641 PANTHER COBRA-LIKE PROTEIN 7 5 639 - -
Lal7g0963 641 PANTHER COBRA-LIKE PROTEIN 7 5 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0963 Lal-Chr7 15946200 15949233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0963 27 624 COBRA Gene Family AT4G16120 66.113 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0963 - - gmx:100814396 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0963 7 15946200 15949233 Lal7g0963 7 15946200 15949233 ECH
Lal14g1568 14 16288329 16291349 Lal7g0963 7 15946200 15949233 LSH