Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0958 ATGACTCATTCATCATCCTTTCAGTTCAAGTGGCAATTGGTCAAGAAAGCTTCTCAAGTGTTTTATTTGCATTTTAAACTAAAGAAGCGTGCGTTTATCGAGGAAATGCAAGAGAGGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACTCACACCCTCGATGCAAGATGATGATGAAGCGGACGGTGAAGCTGTTCCTTTACATCATCAAGATGAAAGTGCCAAGGATAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGGCCAGCCTTAGGAAGACTACAGTCGATATCCGCAAGGGCAAAGATTGCGATGCAGGGGTACCTAAACCACTTTTTGGGAAATATCAGTATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTTTCAAAGTTATCTTTTTCACCTGAATATGGCTCTAAGCTGAAGGAAGAATATGTGAGGGTGATGCATCTGCCTAAAATTCCAAAGGATGATGATGGTGGTTCTAGACGGTGTTGTATGTCCGACTGTTTTAGTTGTTGTAATGATAACTTGCAAAAGGTTTGGGCAGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATGTGCAACCTTTGGACATTATTGTTTTTGATGTACTACCTCCCTCAGATGGGAAAGGGGATGGTCATCTATCACTAGCAAAGGAAATAAAAGAACGAAATCCTTTACGGCATTCATTCAAGGTGACTTGTGGAAACCGTAGCATTGAACTTAGAGTGAAAAGTAGTCGAAAAGTTGCAGATTGGCTTGCTGCAATTAATGATGCTGGACTAAGGACTCTTGAACGATGGTGTCAACACCACCGCTATGATTCTTTTGCTCCTCCAAGAGGCTTAATCGAAGATGGTAGTCAGGCACAGTGGTTTGTAGATGGACAAGCTGCATTTGAAGCCATTGCCTCTTCAATTAAGAATGCAAAATCAGAGATATTTTTTTGTGGGTGGTGGCTATGCCCAGAATTGTATCTACAGCGTCCTTTTCAGACTGAAGCTTCATCAAGACTTGATAATCTGCTAGAAGAAAAAGCTAAGCAAGGGGTTCAGGTTTACATTCTTCTCTACAAAGAGGTAGCACTTGCTTTGAAAATCAACAGTTTTTATAGCAAGAGAAAGCTTCTTTGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTGCTGGTGTTTACCTTTGGTCACACCATGAAAAAATTGTCATTATTGATCATCAGGTTTGCTTTATTGGGGGACTGGATTTGTGCTTTGGTCGTTATGACACACCTGAACATAAAGTTGGGGATTCACCTCCTCTGGTTTGGCCTGGAAAGGATTATTATAACCCTAGGGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGACCGTGGAAAATATCCCCGTATGCCTTGGCATGATGTTCATTGTGCCCTATGGGGACCACCTTGTCGGGACATTGCTAGGCACTTTGTTGAGAGATGGAATTATGCCAAGAGGAACAAAGCTCCAAATCAGCAAGCAATACCATTACTCATTCCTCGGCATCATATGGTTATTCCGCACTACATGGGGATAAGTATAGATGATACTGCCATTGAGAGGGGAGATTCATTTTCCTTATCATCACAAGATATTCCTCTGCTTTTGCCTCAGGAGTCTGGTGGGCTGAATATTTCTATAAGAGAATCAAAATTCAATAGGTTAAGCTCATTTTCACATCTCCACGACCAGTCAAATAGGGTCAGCAGCAGTCTTGCTTTCTCTTTACCAAAAGCCAAAATTGAACCTTCAGATATAGCAATGAAGGGTCTTAGTGGTGTGAATTATCATGACAAAATGTCTTTGGATAGAGTGTCTCATGTTGATATACAAAGCACAGCTACAGAATGGTGGAAAACACCAGAACATGGTGATCATGCAGGTCCTGAAGATGAATCACGACAAGTTGGCCCACGTGCTTCCTGCCGTTGTCAGGTTATTAGGAGTGTCAGTCAATGGTCTGCTGGAACAAGAAAAACCGAAGAGAGCATCCACAATGCCTATTGCTCTCTTATTGAGAAAGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGGGACGACATAATACGAAATCGTGTGTCAGAAGCTTTATGTCGACGGATTATACGAGCTTATGAGGATAACAAACTTTTCAGGGTTATAATTGTCATACCACTCCTGCCTGGCTTTCAGGGGGGTCTGGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAATTCTATATTACATAATCTGTTTCAACTTCTTGGTCCAAGAATACAAGATTACATCTCATTCTATGGCCTCAGGGCTTATGGTAGACTCTCTGATAATGGCCCTGTAGCAACCAACCAGGTTTATGTTCACAGTAAAATCATGATTGTTGATGATTGTACATGTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGTTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGATGGAGAATTGATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAATTCTCCTTGACTCTCCGGTTGTCATTATGGTCTGAACATTTAGGTCTCCAGGCAGGAGAGGTTAATCGAATAATGGACCCGGTTGTTGAGTCTACTTATAAGGATATCTGGATGGCAACAGCAAAGACAAATACTACAATTTACCATGATGTCTTTTCTTGTGTGCCTAATGATGAGATACACACCAGATTTTCTTTCAGACAAAGTGTAGCTTCTTGGAAAGAAAAAAATGGCCATACTACTATTGATTTGGGAATAGCCCCCAAAAATGTAGAATATTATCACAATGGAGGCATCAAGAAAGTAGAAGCCTTGGAGAGATTAGCATCAGTGAAGGGTCATCTAGTTTCTTTTCCTCTAGAGTTCATGAGTTTAGAAAATCTAAGACCTGCTTTTATTGAAAGTGAGTACTATGCTACTCAAGTTTTCCATTGA 3090 0.4071 MTHSSSFQFKWQLVKKASQVFYLHFKLKKRAFIEEMQERQEQVKEWLQNLGIGELTPSMQDDDEADGEAVPLHHQDESAKDRDVPSSAALPIIRPALGRLQSISARAKIAMQGYLNHFLGNISIVNSPEVCKFLEVSKLSFSPEYGSKLKEEYVRVMHLPKIPKDDDGGSRRCCMSDCFSCCNDNLQKVWAVLKPGFLALLADPFDVQPLDIIVFDVLPPSDGKGDGHLSLAKEIKERNPLRHSFKVTCGNRSIELRVKSSRKVADWLAAINDAGLRTLERWCQHHRYDSFAPPRGLIEDGSQAQWFVDGQAAFEAIASSIKNAKSEIFFCGWWLCPELYLQRPFQTEASSRLDNLLEEKAKQGVQVYILLYKEVALALKINSFYSKRKLLCIHENVRVLRYPDHFSAGVYLWSHHEKIVIIDHQVCFIGGLDLCFGRYDTPEHKVGDSPPLVWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVERWNYAKRNKAPNQQAIPLLIPRHHMVIPHYMGISIDDTAIERGDSFSLSSQDIPLLLPQESGGLNISIRESKFNRLSSFSHLHDQSNRVSSSLAFSLPKAKIEPSDIAMKGLSGVNYHDKMSLDRVSHVDIQSTATEWWKTPEHGDHAGPEDESRQVGPRASCRCQVIRSVSQWSAGTRKTEESIHNAYCSLIEKAEHFIYIENQFFISGLSGDDIIRNRVSEALCRRIIRAYEDNKLFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLFQLLGPRIQDYISFYGLRAYGRLSDNGPVATNQVYVHSKIMIVDDCTCLIGSANINDRSLLGSRDSEIGVIIEDGELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLQAGEVNRIMDPVVESTYKDIWMATAKTNTTIYHDVFSCVPNDEIHTRFSFRQSVASWKEKNGHTTIDLGIAPKNVEYYHNGGIKKVEALERLASVKGHLVSFPLEFMSLENLRPAFIESEYYATQVFH 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0958 1029 CDD PLDc_vPLD1_2_yPLD_like_2 686 870 - -
Lal7g0958 1029 Gene3D Endonuclease Chain A 650 886 - -
Lal7g0958 1029 SUPERFAMILY Phospholipase D/nuclease 271 531 - -
Lal7g0958 1029 SUPERFAMILY Phospholipase D/nuclease 664 875 - -
Lal7g0958 1029 Gene3D Endonuclease Chain A 297 528 - -
Lal7g0958 1029 Coils Coil 29 49 - -
Lal7g0958 1029 MobiDBLite consensus disorder prediction 66 83 - -
Lal7g0958 1029 Gene3D - 180 278 IPR011993 -
Lal7g0958 1029 CDD PH_PLD 125 274 - -
Lal7g0958 1029 Pfam Phospholipase D Active site motif 411 438 IPR001736 GO:0003824
Lal7g0958 1029 PANTHER PHOSPHOLIPASE D ZETA 2 8 1026 - -
Lal7g0958 1029 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 411 438 IPR001736 GO:0003824
Lal7g0958 1029 PANTHER PHOSPHOLIPASE D 8 1026 IPR015679 -
Lal7g0958 1029 SUPERFAMILY PH domain-like 183 277 - -
Lal7g0958 1029 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 826 853 IPR001736 GO:0003824
Lal7g0958 1029 PIRSF PLD_euk 1 547 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lal7g0958 1029 PIRSF PLD_euk 631 1029 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lal7g0958 1029 Pfam PLD-like domain 699 873 IPR025202 -
Lal7g0958 1029 CDD PLDc_vPLD1_2_yPLD_like_1 304 448 - -
Lal7g0958 1029 MobiDBLite consensus disorder prediction 57 85 - -
Lal7g0958 1029 SMART pld_4 411 438 IPR001736 GO:0003824
Lal7g0958 1029 SMART pld_4 826 853 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0958 Lal-Chr7 15906474 15913265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0958 8 1029 Phospholipase D Gene Family (Wang group) AT3G05630 59.693 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0958 K01115 - gmx:100780514 1682.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0958 7 15906474 15913265 Lal7g0958 7 15906474 15913265 ECH