Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0956 ATGAATTCCAATTACTCCAAATCTAACCAATCCAAAACACCATCTTCATCTTCTGTTTCTCTCAATAACTTCAACTTCGATTTCGATCTTGGTATCGGATCCAATCGATCTAAACCACTCAACGATCATAAAAAACCTAACCCCAACAATTCCTCTTATTCCTATTCTACCCCTTCTTCTCAACCAAGACCTGCGTGGCAACCCAACAAGCCATCATGGACCCACCAACCAGCACCGGTTCATACGAACCCGACCGGGTTACCGGGTGGACCCACTTCCATGGCTGGTGATATCTTTGGAAAAACATGGGGATCAACGCAGACTCAACCCACTATTGGTATTATCAATAACAAAAACCCTAATCTCTTTGGTGATTTGGTTAGTTCTGCTTTGGGTCAGGGCTCGAATAAAATTTCTTCTTCTTCTTCCTCCAATGTTCCTCTAAAAAATGCAACTTTACCTTCCAACAAAAACTCTTCATTTTCTATGGGGAATTTGGGAGATTCTTTGCCTAAAACTGGTAACACCAACACTGTTCAAAGTAGTTCTAGTTTGGGATCTTCTGGTAATTTTGTGGGTCTTAGTGGGAATAGTATGAATGCTAAAAAAAGTTTCAATCTTGGTGCTCCTATGAGTAGTGGAATTGGGATAAATTCTAATAATAATGACAGAGATCCATTTAGTTCTCTGGCTAGTGGTATTGGATCTAAGCCTTCTGGTAGTGTTAATTTATCTGCTAATAAACCCCAAAAGGTTGATTATGCTGATGATGGTTTTGGAGATTTTCAGAATGCTTCAAAATCAACCCCTACTGCTTCATTTCCATCAAAGGGTAGTGCAGGAATTGATATCGATTTTAATGGATTCGCGGCCTCGAATCAGAGCCCTCCTGTTCAGCCATATGGTGGTGGTGATCCAATGGACATGCTTTTCTCAGCTTCCGCGGCATCGGCTGGAGGTGCGTCTGGAGGGAAACCCGCTTCTGAAATGGATGATTGGGGTTTGGAATCGGATTTTGGCGGGGGAAGCCATGATGGGGGTGGCTCAACTATGGAGCTTGAAGGGCTTCCACCACCTCCTGCTGGGATATCAGGTTCGACTGCGAAAGGAAAGGGGATGGATAGTTACAAGCAGGGCCAGTTTGCTGATGCTATTAAATGGCTCTCTTGGGCTGTCATCCTTTTAGAGAAAGGTGGGGATAGTGCGGCCACATTCGAGGCTTTGTCGTCCAGGGCTTCTTGTTACAAAGAAGTTGGAGAGTATAAGAAGGCAGTTGCGGATTGTACAAAGGTTCTTGAAAATGATAAGGCCAATGTATCTGTCCTCGTACAGCGAGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGGACGGTGCTGAAGATTGATCCCAGTAATAGAATTGCTAAAAGTACTGTTCACCGGTTGGCTAAGATGGCCGAATAG 1464 0.4385 MNSNYSKSNQSKTPSSSSVSLNNFNFDFDLGIGSNRSKPLNDHKKPNPNNSSYSYSTPSSQPRPAWQPNKPSWTHQPAPVHTNPTGLPGGPTSMAGDIFGKTWGSTQTQPTIGIINNKNPNLFGDLVSSALGQGSNKISSSSSSNVPLKNATLPSNKNSSFSMGNLGDSLPKTGNTNTVQSSSSLGSSGNFVGLSGNSMNAKKSFNLGAPMSSGIGINSNNNDRDPFSSLASGIGSKPSGSVNLSANKPQKVDYADDGFGDFQNASKSTPTASFPSKGSAGIDIDFNGFAASNQSPPVQPYGGGDPMDMLFSASAASAGGASGGKPASEMDDWGLESDFGGGSHDGGGSTMELEGLPPPPAGISGSTAKGKGMDSYKQGQFADAIKWLSWAVILLEKGGDSAATFEALSSRASCYKEVGEYKKAVADCTKVLENDKANVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIAKSTVHRLAKMAE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0956 487 SMART tpr_5 439 472 IPR019734 GO:0005515
Lal7g0956 487 SMART tpr_5 405 438 IPR019734 GO:0005515
Lal7g0956 487 SMART tpr_5 365 398 IPR019734 GO:0005515
Lal7g0956 487 MobiDBLite consensus disorder prediction 1 20 - -
Lal7g0956 487 Pfam Tetratricopeptide repeat 407 438 IPR019734 GO:0005515
Lal7g0956 487 Pfam Tetratricopeptide repeat 440 472 IPR019734 GO:0005515
Lal7g0956 487 MobiDBLite consensus disorder prediction 44 89 - -
Lal7g0956 487 MobiDBLite consensus disorder prediction 133 160 - -
Lal7g0956 487 PANTHER OS03G0340700 PROTEIN 1 487 - -
Lal7g0956 487 MobiDBLite consensus disorder prediction 28 100 - -
Lal7g0956 487 Gene3D Tetratricopeptide repeat domain 365 486 IPR011990 GO:0005515
Lal7g0956 487 SUPERFAMILY TPR-like 369 477 IPR011990 GO:0005515
Lal7g0956 487 ProSiteProfiles TPR repeat profile. 439 472 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0956 380 487 Calmodulin-binding Proteins AT3G25230 31.532 1.06e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0956 - - pvu:PHAVU_003G107800g 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0956 7 15894814 15897448 Lal7g0956 7 15894814 15897448 ECH