Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0954 ATGGAAAACGTTGATCCCAACATTGAGCCAAAAAAATCTAAATATGCCCTCAGCGGAGAAAAGATGCTAATCTGCACTGTCGTTCTATTAATCGTTATCCTCGTAATGATTTGCATCCACCTCTACGTCCGGTGGTACCTTCTCCGTATACGCCACCGCCGTAGCCACAACCACAACCACCAAAACGGTCGTTCTCGCTTCGTGTTCTACATCGACCCCGCGCTCACGACAACCTCACGCGGCCTCGAAGCCTCCGTGATTGCCACGCTCCCAGTCTTCACGTTCTCACCCAACAGTGAAGCGGTTGAATGCGCGGTTTGTTTATCGGAATTCGAAGACGGTGAATCGGGTCGGGTTTTGCCGAAATGTAAACACAGTTTTCATATTGAGTGTATTGATATGTGGTTCGAGTCTCATTCTACTTGTCCTATTTGTAGAGTCCACGTGGAGGCTCCTCCTCAACCGGAAGTAGTTGTTAATGTTTCTGAACCGGGTTCGAGTTCTGAGTTGAACCGGACTGGGGTAGCGATTTATTCTTCTTCGTCGTTTGTGAGTTTGGGGACAGAGACTGATTACGACTCGGCGTCTCCGTCGTCGTTTCGATCGCCTATGATGTCGTTTAAGAGAATTTTAAGCAGAGGGAGGAAATCGTCGTTGGTTGTAGAACGAGGAGGAGAGGAGACTCTACGAGTTGACTCGGAGTGTAATAATGAAGTGACAAATCTAGAATCCAAATGA 738 0.4783 MENVDPNIEPKKSKYALSGEKMLICTVVLLIVILVMICIHLYVRWYLLRIRHRRSHNHNHQNGRSRFVFYIDPALTTTSRGLEASVIATLPVFTFSPNSEAVECAVCLSEFEDGESGRVLPKCKHSFHIECIDMWFESHSTCPICRVHVEAPPQPEVVVNVSEPGSSSELNRTGVAIYSSSSFVSLGTETDYDSASPSSFRSPMMSFKRILSRGRKSSLVVERGGEETLRVDSECNNEVTNLESK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0954 245 CDD RING-H2_EL5_like 103 146 - -
Lal7g0954 245 SUPERFAMILY RING/U-box 98 152 - -
Lal7g0954 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 152 IPR013083 -
Lal7g0954 245 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 10 188 - -
Lal7g0954 245 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Lal7g0954 245 PANTHER RING-H2 FINGER PROTEIN ATL64 10 188 - -
Lal7g0954 245 Pfam Ring finger domain 103 146 IPR001841 -
Lal7g0954 245 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0954 Lal-Chr7 15888221 15888958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0954 5 218 Rapid Response to Elicitors AT3G16720 42.636 1.65e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0954 - - gmx:100800859 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0954 7 15888221 15888958 Lal7g0954 7 15888221 15888958 ECH
Lal7g0954 7 15888221 15888958 Lal19g1110 19 14715766 14716401 LSH