Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0952 ATGGGGAACAAAAAGCGAAACCCTCACGCTCCGCGTTCCAAACATTCTCCGGCGGCTTCTCCGGTGACGCAATCTGCCATCGGCGGAGCCGCCGATGTTCATGTGTCACCTGACTCCGACTCGTGCATGGTGGTTTCTGATCTCGCCCTTCATAACCCTAGCAATAAGATCGAATTGACCCCTAAGACTGAGGGTTCCGTTTACACCTTAATCAAGCTTGAATGTGATAAAGCCCTAAATGCTTTTCGGCGTGGTAACCATAACAGAGCGCTTAAGATGATGAAGGATTTGTGCTCCAAACATGAGGGTTCGGTTTATGCTGGGTTCACTCAGCGAGTTCAGGGCTTTGTGTTGTACAAGGTGTCAATGATTATGAACGACCCAGCCGTGAAGCAAAGGCATTTGAGGAATGCTGTTGATTCGGCACGGAGAGCGACTGAGCTGTCGCCAAATTCGATTGAGTTTTCGATGTTTTATGGTAACTTGCTACTGGAGGCTGCTAGTGAGGCGAAGGATTATGAGGAGGTGGTGCAGGAGTGTGAGAGGGCACTCGCGGTTGTGAACCCTAATGATCCTGCAAAGGAGAGTTTGCAGGATGAGAGCGAGCATAAATCATCCACTGTGGAGTCTCGAATAACACATGTGCAGAATGAGTTGAGGCAGCTAATTCAGAAGTCTAATATAGCGTCGTTATCGACTTGGATGAAGACTTTGGGTAACGGTGAGGAGAGGTTTCGGTTGATTCCGATAAGGAGGCCCGCCGAGGATCCAATGGAGATGAGGTTGGCTCAGAATAGAAGGCCAAATGAGATTAAGAAGGTGTCCAAGACACCAGAAGAAAGAAGGAAAGAAATTGAAGTTCGAGTGGCTGCTGCGAGGCTGTTGCAGCAGAAGTCAGAATCACCTCAATATCCAAATGAAGCAGATAGGGACGAGAGGGCATTGGATTCATCAACAGGATCTGGTCATAGAGTCGGTGATAGGCGTAAGTATGGGAATGTGAGAAAGAATGGGTCTACTAATGAAAGGAAGAATTTGGTGCACTCGTTTTGGAATTCAGTCAGTATGGAAATGAAGGAGGAGTTGCTTAGAATTAGAATTAGTGATCTCAAGTTGCATTATGGGTCTTCAAAGGATACTTTGCCGAGAGATGTTTTATCAGAAGCTTTATCTTATGCTGAGTTTAGTAAAACATGGAAATTCTGGCTTTGCTGCGAGTGTGATGAGAAATTTACTAATCCGGAATCTCACAGGCAGCATGTTATGCAGGAACACATGCGGAATCTCTTGCCAAAGATGCAGAGACTTTTGCCCCAAAATGTTGACAATGAATGGATTGACATGATTTTAAATTGCTCTTGGAAGCCTCTGGATGTCTCAGCTGCAATTAGAATGCTTGACAATAAATCAAAATTCAAGGTTTCTCCATTCACCGAGGATTCATACTTTGGGCCTCATACTCAGAAACATCCTCATACTCAGAACTACAGTTATTGTTTTAGAGATGCAAGTGGTTCTTACCATGAGAAGGAAAGTTTGGGGTATAGTCTTCATAATGGTACAACAGAAGGCAGTGACTACTGTAAAATTGCAGGGAGTGATATTGCAGAAGGTGTTGAAGATCAAGGGTCTATAGCATACCCTTTTCCGGATAGTTGGCCGGTATCTGATGACTCTGAGCGTGCAAAACTTCTGGAGAAAATTCATGCAGTTTTTGAGATGCTTATCAGGCACAAATTTCTTGCTGCTAGTCATCTTAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTCTTGCAGCTGGTTCTCTACTTGTGAACCGCGGTGTTGATCAAAGGCCAGTGTGCATATGCTTTCTGGGAGCTTCACAGCTCAAGAAAATTCTCCAATTTCTTCAGGAGCTTTCTCATGCTTGTGGATTGGGTAGATATCCTGACAAAAGTAGTGGTCCCATGAATGATTCGCAAAATATCAGTCAACTTCCTGAGATCAAAGAGAAGATTGTTCTCAATGGAGATTCATCATACCTTCTTCTGGATGAGTGTTTACTGCGAACACAAGTCACTTCTGGTACAGCTGAGGGGGCTGTCTTGGATGATGTGACTGCCCCAGGTTCTCCTGATAGGGTTTCACACAATAACGATGCGTTGCTATCCTGTATATTTTCAAGTTCACCTATTGCAGATCAATTAATATCATGGATGAGGGCCAAAGAAGATAAACAGAAACAAGGAAAGGAAATTGTTGAGATGCTCGAGAAGGAGTTTTTACAGCTACAGGGCCTCTGTGAAAAAAAGTTTGAGCGCATTAGTTATGAGGAAGCACTGCAGACTGTAGAGGATCTTTGTCTTGAAGAAGGTAAAAAGAGGGAACATGGTGGTGAATTTGTTAAGCGAAGCTATGAGTCTGTTTTAAGAAAGCGGAGAGAAGAGCTCGTTGAAAGTGAGAATGATGTGATATATGTAAGCAATAGGTTTGAGTTGGATGCTATATCAAATGTTCTGCAAGAAGCTGAAGCAATGAATGTTAACCAATTTGGTTATGAGGAAACTTATGCGGGTGTGAATTCTCAATTATGTGACTTGGAATCTGGTGAAGATGAATGGAGAATGAAGGACTACTTGCATCAAATGGATGGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAGCACTTATCTATAGAGCTTAGCAAAATTGATGCGCGAATCATAAGAAATGTTACAGACATGCAGCAAATGGAACTCAAGCTTGGGCCTATTTCTGCCTATGATTATCGATCAATACTAATGCCTCTAGTGAAGTCGTACCTCAGGGCGGTTTTAGAAGATTTGGCTGAGAAAGACGCAACAGAGAAGTCTGATGCTGCAAGAGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGGTTGCTAAAGGGGGAAGTGAGAACACAAGACATTTGGAGAAGACTAAAGATAAGAAGAATAAAGATCACAGGAAAACAAGAGATTTGAAGGCTGCAAGTGGTCATGGGCAGCTCTTGCTTCAAGATACAATTCCTGAAGACACATTGACTTTTCTCATAAGTGTTTCTGATGGACTTTTCTGCTGCAGTTCCAATCCAGTTGCACCTGATTGTGACTTGGTCGTTACTGTGAATGGTGATGACTTGGAACAAGAGGAAGATGAATTTAGACGAAGAATTGAGCTAGAGGAGGAGGAGAAAAAACTTGAAGAAACATTGGAATTTCAGCGAAGGATAGAAAATGAAGCCAAACAGAAGCACCTCGCTGAGCAGCAAAAGAAATCATCAGGGACCTATATAGAGGAAGTGGTGGACAGACTTCAGGATGTCCGGTTGGAGGCAGTTGCTGATGGCCCAGAGGTGCATGAACATTTAAGACCACATACACCGGATCAGTTGGCAACGAAGAATGGGTTCCCGAGCAATTTGGACAGTGTGCTTATCATCCCAGCAAATGGTTCTTCAGAGCCAGCTAAATTTTCAGCTGATTCGTCTGCCCAAAAGATTGGTCGTTTGCATCAGTCAAAAGTTAAACAAGATCTGCCTAATGGAGTTATTTCAGAGAATGGTCTTCAGTTGCCTGATAGGCGTCAAGGCAAAAAGCATAAACGGCATAAGAATTCTTCCAGAATCGTTGATGGAAAGTTTGAACCTGTCTCATTGGAAAAGAATATTGAAAATACACACAATGACAATCATTTAAGAGAGCAAGTTGATTCCCATAACAAACAAGATGCTAACAATGTGTGGGAAAACCATGGATCAAAGGCATTGAAAGAGTTGACAATGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAAGAGCTGTACGCCAAAGTCTGGACACATATCAAGCACGTGGCAAAATGCCTTCAGTTTCTGGTTTAAGAATGTCGGAGAGAGCTTCCTCACAAGTAGATAGTTCTGGTTTTTTACCAGAGGAAGTCCCAACCGAGGATGGGAGCGGAGCTACTTTGCTTGGTACCGGGCTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATATAAGATGCTTTCGGGAAGAATTTCTTGGCAGATCAAGATCAGAGCATGTACATGTGGGTAACCCATGTGTTGTCTGTGCATTGTATGAAATCTTTTATGCGCTGGACCTTTCATCAAAAGATCCAAGGAGAGAAGCAGTTGCACCTACCTCCCTGCGAATGGCTCTAAGCAACTTATATCCAGATAGTAACTTCTTCCAAGAGGCTCAGATGAACGATGCTTCTGAGGTACTGGCAGTGATATTTGATTGCCTTCATCGATCTTTTACTCGTAGTTCGAGTGTTTCTGATGTGGAATCTGTGGAAAGCAACTGCACAGGATCTTGGGATTGTGCAAGCAGTACTTGTATCGCACATTCACTTTTTGGAATGAACATCTTTGAACAAATGAACTGCTATCATTGTGGTCTTGAGTCCAGACATTTGAAGTATACTTCTTTCTTTCACAATATAAATGCGAATGCCCTCCGGACAATGAAGGATATGTGTGCTGAAACTGAAAGCTCCTTTGATGAGCTTTTGAATCTTGTGGAGATGAACCATCAGTTAGCTTGTGATGTAGAAGTTAGTGGATGTGGCAAGCTCAATTACATCCATCACTTTCTTTCAACTTCACCCCATGTATTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGTTGATGATATAAAAGCTACACTGGCAGCCTTGAGCACCGAGATAGATATCAGCGTCCTTTATCGTGGTTTAGATCCTAAAAACACCCATGGCTTGGTTTCGGTGGTTTGCTACTATGGCCAACATTACCATTGCTTTGCTTATAGCCATGACCATCAACAATGGATAATGTATGACGACAAGACTGTCAAGATAATTGGTAGTTGGGCAGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTATGAAGCTGTAAACTAG 5016 0.426 MGNKKRNPHAPRSKHSPAASPVTQSAIGGAADVHVSPDSDSCMVVSDLALHNPSNKIELTPKTEGSVYTLIKLECDKALNAFRRGNHNRALKMMKDLCSKHEGSVYAGFTQRVQGFVLYKVSMIMNDPAVKQRHLRNAVDSARRATELSPNSIEFSMFYGNLLLEAASEAKDYEEVVQECERALAVVNPNDPAKESLQDESEHKSSTVESRITHVQNELRQLIQKSNIASLSTWMKTLGNGEERFRLIPIRRPAEDPMEMRLAQNRRPNEIKKVSKTPEERRKEIEVRVAAARLLQQKSESPQYPNEADRDERALDSSTGSGHRVGDRRKYGNVRKNGSTNERKNLVHSFWNSVSMEMKEELLRIRISDLKLHYGSSKDTLPRDVLSEALSYAEFSKTWKFWLCCECDEKFTNPESHRQHVMQEHMRNLLPKMQRLLPQNVDNEWIDMILNCSWKPLDVSAAIRMLDNKSKFKVSPFTEDSYFGPHTQKHPHTQNYSYCFRDASGSYHEKESLGYSLHNGTTEGSDYCKIAGSDIAEGVEDQGSIAYPFPDSWPVSDDSERAKLLEKIHAVFEMLIRHKFLAASHLNKVIQFTMGEIQGLAAGSLLVNRGVDQRPVCICFLGASQLKKILQFLQELSHACGLGRYPDKSSGPMNDSQNISQLPEIKEKIVLNGDSSYLLLDECLLRTQVTSGTAEGAVLDDVTAPGSPDRVSHNNDALLSCIFSSSPIADQLISWMRAKEDKQKQGKEIVEMLEKEFLQLQGLCEKKFERISYEEALQTVEDLCLEEGKKREHGGEFVKRSYESVLRKRREELVESENDVIYVSNRFELDAISNVLQEAEAMNVNQFGYEETYAGVNSQLCDLESGEDEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNVTDMQQMELKLGPISAYDYRSILMPLVKSYLRAVLEDLAEKDATEKSDAAREAFLAELALDSKKVAKGGSENTRHLEKTKDKKNKDHRKTRDLKAASGHGQLLLQDTIPEDTLTFLISVSDGLFCCSSNPVAPDCDLVVTVNGDDLEQEEDEFRRRIELEEEEKKLEETLEFQRRIENEAKQKHLAEQQKKSSGTYIEEVVDRLQDVRLEAVADGPEVHEHLRPHTPDQLATKNGFPSNLDSVLIIPANGSSEPAKFSADSSAQKIGRLHQSKVKQDLPNGVISENGLQLPDRRQGKKHKRHKNSSRIVDGKFEPVSLEKNIENTHNDNHLREQVDSHNKQDANNVWENHGSKALKELTMEDEEEERFQADLKRAVRQSLDTYQARGKMPSVSGLRMSERASSQVDSSGFLPEEVPTEDGSGATLLGTGLKNEVGEYNCFLNVIIQSLWHIRCFREEFLGRSRSEHVHVGNPCVVCALYEIFYALDLSSKDPRREAVAPTSLRMALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTRSSSVSDVESVESNCTGSWDCASSTCIAHSLFGMNIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKDMCAETESSFDELLNLVEMNHQLACDVEVSGCGKLNYIHHFLSTSPHVFMTVLGWQNTCESVDDIKATLAALSTEIDISVLYRGLDPKNTHGLVSVVCYYGQHYHCFAYSHDHQQWIMYDDKTVKIIGSWADVLTMCERGHLQPQVLFYEAVN 1671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0952 1671 Gene3D Tetratricopeptide repeat domain 72 211 IPR011990 GO:0005515
Lal7g0952 1671 Coils Coil 1051 1091 - -
Lal7g0952 1671 MobiDBLite consensus disorder prediction 262 340 - -
Lal7g0952 1671 CDD Peptidase_C19 1427 1668 - -
Lal7g0952 1671 Pfam Protein of unknown function (DUF627) 77 187 IPR006866 -
Lal7g0952 1671 ProSitePatterns Zinc finger C2H2 type domain signature. 404 425 IPR013087 -
Lal7g0952 1671 Coils Coil 163 183 - -
Lal7g0952 1671 Pfam Protein of unknown function (DUF629) 347 884 IPR006865 -
Lal7g0952 1671 SUPERFAMILY Cysteine proteinases 1336 1668 IPR038765 -
Lal7g0952 1671 MobiDBLite consensus disorder prediction 1189 1213 - -
Lal7g0952 1671 Pfam Ubiquitin carboxyl-terminal hydrolase 1337 1667 IPR001394 GO:0004843|GO:0016579
Lal7g0952 1671 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1671 - -
Lal7g0952 1671 MobiDBLite consensus disorder prediction 1 26 - -
Lal7g0952 1671 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1671 - -
Lal7g0952 1671 Gene3D Cysteine proteinases 1327 1669 - -
Lal7g0952 1671 MobiDBLite consensus disorder prediction 304 337 - -
Lal7g0952 1671 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1336 1670 IPR028889 -
Lal7g0952 1671 MobiDBLite consensus disorder prediction 976 1004 - -
Lal7g0952 1671 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0952 Lal-Chr7 15855772 15866455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0952 69 1668 C2H2 Transcription Factor Family AT3G47890 55.926 0.0 1693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0952 - - adu:107493676 2357.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0952 7 15855772 15866455 Lal7g0952 7 15855772 15866455 ECH
Lal7g0952 7 15855772 15866455 Lal19g1108 19 14693207 14703621 LSH