Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal7g0952 | ATGGGGAACAAAAAGCGAAACCCTCACGCTCCGCGTTCCAAACATTCTCCGGCGGCTTCTCCGGTGACGCAATCTGCCATCGGCGGAGCCGCCGATGTTCATGTGTCACCTGACTCCGACTCGTGCATGGTGGTTTCTGATCTCGCCCTTCATAACCCTAGCAATAAGATCGAATTGACCCCTAAGACTGAGGGTTCCGTTTACACCTTAATCAAGCTTGAATGTGATAAAGCCCTAAATGCTTTTCGGCGTGGTAACCATAACAGAGCGCTTAAGATGATGAAGGATTTGTGCTCCAAACATGAGGGTTCGGTTTATGCTGGGTTCACTCAGCGAGTTCAGGGCTTTGTGTTGTACAAGGTGTCAATGATTATGAACGACCCAGCCGTGAAGCAAAGGCATTTGAGGAATGCTGTTGATTCGGCACGGAGAGCGACTGAGCTGTCGCCAAATTCGATTGAGTTTTCGATGTTTTATGGTAACTTGCTACTGGAGGCTGCTAGTGAGGCGAAGGATTATGAGGAGGTGGTGCAGGAGTGTGAGAGGGCACTCGCGGTTGTGAACCCTAATGATCCTGCAAAGGAGAGTTTGCAGGATGAGAGCGAGCATAAATCATCCACTGTGGAGTCTCGAATAACACATGTGCAGAATGAGTTGAGGCAGCTAATTCAGAAGTCTAATATAGCGTCGTTATCGACTTGGATGAAGACTTTGGGTAACGGTGAGGAGAGGTTTCGGTTGATTCCGATAAGGAGGCCCGCCGAGGATCCAATGGAGATGAGGTTGGCTCAGAATAGAAGGCCAAATGAGATTAAGAAGGTGTCCAAGACACCAGAAGAAAGAAGGAAAGAAATTGAAGTTCGAGTGGCTGCTGCGAGGCTGTTGCAGCAGAAGTCAGAATCACCTCAATATCCAAATGAAGCAGATAGGGACGAGAGGGCATTGGATTCATCAACAGGATCTGGTCATAGAGTCGGTGATAGGCGTAAGTATGGGAATGTGAGAAAGAATGGGTCTACTAATGAAAGGAAGAATTTGGTGCACTCGTTTTGGAATTCAGTCAGTATGGAAATGAAGGAGGAGTTGCTTAGAATTAGAATTAGTGATCTCAAGTTGCATTATGGGTCTTCAAAGGATACTTTGCCGAGAGATGTTTTATCAGAAGCTTTATCTTATGCTGAGTTTAGTAAAACATGGAAATTCTGGCTTTGCTGCGAGTGTGATGAGAAATTTACTAATCCGGAATCTCACAGGCAGCATGTTATGCAGGAACACATGCGGAATCTCTTGCCAAAGATGCAGAGACTTTTGCCCCAAAATGTTGACAATGAATGGATTGACATGATTTTAAATTGCTCTTGGAAGCCTCTGGATGTCTCAGCTGCAATTAGAATGCTTGACAATAAATCAAAATTCAAGGTTTCTCCATTCACCGAGGATTCATACTTTGGGCCTCATACTCAGAAACATCCTCATACTCAGAACTACAGTTATTGTTTTAGAGATGCAAGTGGTTCTTACCATGAGAAGGAAAGTTTGGGGTATAGTCTTCATAATGGTACAACAGAAGGCAGTGACTACTGTAAAATTGCAGGGAGTGATATTGCAGAAGGTGTTGAAGATCAAGGGTCTATAGCATACCCTTTTCCGGATAGTTGGCCGGTATCTGATGACTCTGAGCGTGCAAAACTTCTGGAGAAAATTCATGCAGTTTTTGAGATGCTTATCAGGCACAAATTTCTTGCTGCTAGTCATCTTAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTCTTGCAGCTGGTTCTCTACTTGTGAACCGCGGTGTTGATCAAAGGCCAGTGTGCATATGCTTTCTGGGAGCTTCACAGCTCAAGAAAATTCTCCAATTTCTTCAGGAGCTTTCTCATGCTTGTGGATTGGGTAGATATCCTGACAAAAGTAGTGGTCCCATGAATGATTCGCAAAATATCAGTCAACTTCCTGAGATCAAAGAGAAGATTGTTCTCAATGGAGATTCATCATACCTTCTTCTGGATGAGTGTTTACTGCGAACACAAGTCACTTCTGGTACAGCTGAGGGGGCTGTCTTGGATGATGTGACTGCCCCAGGTTCTCCTGATAGGGTTTCACACAATAACGATGCGTTGCTATCCTGTATATTTTCAAGTTCACCTATTGCAGATCAATTAATATCATGGATGAGGGCCAAAGAAGATAAACAGAAACAAGGAAAGGAAATTGTTGAGATGCTCGAGAAGGAGTTTTTACAGCTACAGGGCCTCTGTGAAAAAAAGTTTGAGCGCATTAGTTATGAGGAAGCACTGCAGACTGTAGAGGATCTTTGTCTTGAAGAAGGTAAAAAGAGGGAACATGGTGGTGAATTTGTTAAGCGAAGCTATGAGTCTGTTTTAAGAAAGCGGAGAGAAGAGCTCGTTGAAAGTGAGAATGATGTGATATATGTAAGCAATAGGTTTGAGTTGGATGCTATATCAAATGTTCTGCAAGAAGCTGAAGCAATGAATGTTAACCAATTTGGTTATGAGGAAACTTATGCGGGTGTGAATTCTCAATTATGTGACTTGGAATCTGGTGAAGATGAATGGAGAATGAAGGACTACTTGCATCAAATGGATGGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAGCACTTATCTATAGAGCTTAGCAAAATTGATGCGCGAATCATAAGAAATGTTACAGACATGCAGCAAATGGAACTCAAGCTTGGGCCTATTTCTGCCTATGATTATCGATCAATACTAATGCCTCTAGTGAAGTCGTACCTCAGGGCGGTTTTAGAAGATTTGGCTGAGAAAGACGCAACAGAGAAGTCTGATGCTGCAAGAGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGGTTGCTAAAGGGGGAAGTGAGAACACAAGACATTTGGAGAAGACTAAAGATAAGAAGAATAAAGATCACAGGAAAACAAGAGATTTGAAGGCTGCAAGTGGTCATGGGCAGCTCTTGCTTCAAGATACAATTCCTGAAGACACATTGACTTTTCTCATAAGTGTTTCTGATGGACTTTTCTGCTGCAGTTCCAATCCAGTTGCACCTGATTGTGACTTGGTCGTTACTGTGAATGGTGATGACTTGGAACAAGAGGAAGATGAATTTAGACGAAGAATTGAGCTAGAGGAGGAGGAGAAAAAACTTGAAGAAACATTGGAATTTCAGCGAAGGATAGAAAATGAAGCCAAACAGAAGCACCTCGCTGAGCAGCAAAAGAAATCATCAGGGACCTATATAGAGGAAGTGGTGGACAGACTTCAGGATGTCCGGTTGGAGGCAGTTGCTGATGGCCCAGAGGTGCATGAACATTTAAGACCACATACACCGGATCAGTTGGCAACGAAGAATGGGTTCCCGAGCAATTTGGACAGTGTGCTTATCATCCCAGCAAATGGTTCTTCAGAGCCAGCTAAATTTTCAGCTGATTCGTCTGCCCAAAAGATTGGTCGTTTGCATCAGTCAAAAGTTAAACAAGATCTGCCTAATGGAGTTATTTCAGAGAATGGTCTTCAGTTGCCTGATAGGCGTCAAGGCAAAAAGCATAAACGGCATAAGAATTCTTCCAGAATCGTTGATGGAAAGTTTGAACCTGTCTCATTGGAAAAGAATATTGAAAATACACACAATGACAATCATTTAAGAGAGCAAGTTGATTCCCATAACAAACAAGATGCTAACAATGTGTGGGAAAACCATGGATCAAAGGCATTGAAAGAGTTGACAATGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAAGAGCTGTACGCCAAAGTCTGGACACATATCAAGCACGTGGCAAAATGCCTTCAGTTTCTGGTTTAAGAATGTCGGAGAGAGCTTCCTCACAAGTAGATAGTTCTGGTTTTTTACCAGAGGAAGTCCCAACCGAGGATGGGAGCGGAGCTACTTTGCTTGGTACCGGGCTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATATAAGATGCTTTCGGGAAGAATTTCTTGGCAGATCAAGATCAGAGCATGTACATGTGGGTAACCCATGTGTTGTCTGTGCATTGTATGAAATCTTTTATGCGCTGGACCTTTCATCAAAAGATCCAAGGAGAGAAGCAGTTGCACCTACCTCCCTGCGAATGGCTCTAAGCAACTTATATCCAGATAGTAACTTCTTCCAAGAGGCTCAGATGAACGATGCTTCTGAGGTACTGGCAGTGATATTTGATTGCCTTCATCGATCTTTTACTCGTAGTTCGAGTGTTTCTGATGTGGAATCTGTGGAAAGCAACTGCACAGGATCTTGGGATTGTGCAAGCAGTACTTGTATCGCACATTCACTTTTTGGAATGAACATCTTTGAACAAATGAACTGCTATCATTGTGGTCTTGAGTCCAGACATTTGAAGTATACTTCTTTCTTTCACAATATAAATGCGAATGCCCTCCGGACAATGAAGGATATGTGTGCTGAAACTGAAAGCTCCTTTGATGAGCTTTTGAATCTTGTGGAGATGAACCATCAGTTAGCTTGTGATGTAGAAGTTAGTGGATGTGGCAAGCTCAATTACATCCATCACTTTCTTTCAACTTCACCCCATGTATTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGTTGATGATATAAAAGCTACACTGGCAGCCTTGAGCACCGAGATAGATATCAGCGTCCTTTATCGTGGTTTAGATCCTAAAAACACCCATGGCTTGGTTTCGGTGGTTTGCTACTATGGCCAACATTACCATTGCTTTGCTTATAGCCATGACCATCAACAATGGATAATGTATGACGACAAGACTGTCAAGATAATTGGTAGTTGGGCAGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTATGAAGCTGTAAACTAG | 5016 | 0.426 | MGNKKRNPHAPRSKHSPAASPVTQSAIGGAADVHVSPDSDSCMVVSDLALHNPSNKIELTPKTEGSVYTLIKLECDKALNAFRRGNHNRALKMMKDLCSKHEGSVYAGFTQRVQGFVLYKVSMIMNDPAVKQRHLRNAVDSARRATELSPNSIEFSMFYGNLLLEAASEAKDYEEVVQECERALAVVNPNDPAKESLQDESEHKSSTVESRITHVQNELRQLIQKSNIASLSTWMKTLGNGEERFRLIPIRRPAEDPMEMRLAQNRRPNEIKKVSKTPEERRKEIEVRVAAARLLQQKSESPQYPNEADRDERALDSSTGSGHRVGDRRKYGNVRKNGSTNERKNLVHSFWNSVSMEMKEELLRIRISDLKLHYGSSKDTLPRDVLSEALSYAEFSKTWKFWLCCECDEKFTNPESHRQHVMQEHMRNLLPKMQRLLPQNVDNEWIDMILNCSWKPLDVSAAIRMLDNKSKFKVSPFTEDSYFGPHTQKHPHTQNYSYCFRDASGSYHEKESLGYSLHNGTTEGSDYCKIAGSDIAEGVEDQGSIAYPFPDSWPVSDDSERAKLLEKIHAVFEMLIRHKFLAASHLNKVIQFTMGEIQGLAAGSLLVNRGVDQRPVCICFLGASQLKKILQFLQELSHACGLGRYPDKSSGPMNDSQNISQLPEIKEKIVLNGDSSYLLLDECLLRTQVTSGTAEGAVLDDVTAPGSPDRVSHNNDALLSCIFSSSPIADQLISWMRAKEDKQKQGKEIVEMLEKEFLQLQGLCEKKFERISYEEALQTVEDLCLEEGKKREHGGEFVKRSYESVLRKRREELVESENDVIYVSNRFELDAISNVLQEAEAMNVNQFGYEETYAGVNSQLCDLESGEDEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNVTDMQQMELKLGPISAYDYRSILMPLVKSYLRAVLEDLAEKDATEKSDAAREAFLAELALDSKKVAKGGSENTRHLEKTKDKKNKDHRKTRDLKAASGHGQLLLQDTIPEDTLTFLISVSDGLFCCSSNPVAPDCDLVVTVNGDDLEQEEDEFRRRIELEEEEKKLEETLEFQRRIENEAKQKHLAEQQKKSSGTYIEEVVDRLQDVRLEAVADGPEVHEHLRPHTPDQLATKNGFPSNLDSVLIIPANGSSEPAKFSADSSAQKIGRLHQSKVKQDLPNGVISENGLQLPDRRQGKKHKRHKNSSRIVDGKFEPVSLEKNIENTHNDNHLREQVDSHNKQDANNVWENHGSKALKELTMEDEEEERFQADLKRAVRQSLDTYQARGKMPSVSGLRMSERASSQVDSSGFLPEEVPTEDGSGATLLGTGLKNEVGEYNCFLNVIIQSLWHIRCFREEFLGRSRSEHVHVGNPCVVCALYEIFYALDLSSKDPRREAVAPTSLRMALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTRSSSVSDVESVESNCTGSWDCASSTCIAHSLFGMNIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKDMCAETESSFDELLNLVEMNHQLACDVEVSGCGKLNYIHHFLSTSPHVFMTVLGWQNTCESVDDIKATLAALSTEIDISVLYRGLDPKNTHGLVSVVCYYGQHYHCFAYSHDHQQWIMYDDKTVKIIGSWADVLTMCERGHLQPQVLFYEAVN | 1671 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal7g0952 | 1671 | Gene3D | Tetratricopeptide repeat domain | 72 | 211 | IPR011990 | GO:0005515 | |
Lal7g0952 | 1671 | Coils | Coil | 1051 | 1091 | - | - | |
Lal7g0952 | 1671 | MobiDBLite | consensus disorder prediction | 262 | 340 | - | - | |
Lal7g0952 | 1671 | CDD | Peptidase_C19 | 1427 | 1668 | - | - | |
Lal7g0952 | 1671 | Pfam | Protein of unknown function (DUF627) | 77 | 187 | IPR006866 | - | |
Lal7g0952 | 1671 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 404 | 425 | IPR013087 | - | |
Lal7g0952 | 1671 | Coils | Coil | 163 | 183 | - | - | |
Lal7g0952 | 1671 | Pfam | Protein of unknown function (DUF629) | 347 | 884 | IPR006865 | - | |
Lal7g0952 | 1671 | SUPERFAMILY | Cysteine proteinases | 1336 | 1668 | IPR038765 | - | |
Lal7g0952 | 1671 | MobiDBLite | consensus disorder prediction | 1189 | 1213 | - | - | |
Lal7g0952 | 1671 | Pfam | Ubiquitin carboxyl-terminal hydrolase | 1337 | 1667 | IPR001394 | GO:0004843|GO:0016579 | |
Lal7g0952 | 1671 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 1 | 1671 | - | - | |
Lal7g0952 | 1671 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Lal7g0952 | 1671 | PANTHER | INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE | 1 | 1671 | - | - | |
Lal7g0952 | 1671 | Gene3D | Cysteine proteinases | 1327 | 1669 | - | - | |
Lal7g0952 | 1671 | MobiDBLite | consensus disorder prediction | 304 | 337 | - | - | |
Lal7g0952 | 1671 | ProSiteProfiles | Ubiquitin specific protease (USP) domain profile. | 1336 | 1670 | IPR028889 | - | |
Lal7g0952 | 1671 | MobiDBLite | consensus disorder prediction | 976 | 1004 | - | - | |
Lal7g0952 | 1671 | MobiDBLite | consensus disorder prediction | 262 | 289 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal7g0952 | Lal-Chr7 | 15855772 | 15866455 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal7g0952 | 69 | 1668 | C2H2 Transcription Factor Family | AT3G47890 | 55.926 | 0.0 | 1693 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal7g0952 | - | - | adu:107493676 | 2357.79 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal7g0952 | 7 | 15855772 | 15866455 | Lal7g0952 | 7 | 15855772 | 15866455 | ECH | |
Lal7g0952 | 7 | 15855772 | 15866455 | Lal19g1108 | 19 | 14693207 | 14703621 | LSH |