Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0951 ATGACCCTTAAGGGTGGCACAACGCAGGCCTGCGCGGCGTGCAAATACCAGAGAAGAAAGTGCACTTCTGAGTGTTTTCTTGCTCCATACTTTCCTGCAGATCAACCCAAGGTATTTCTAAATGTGCACAAACTTTTTGGAGTGAGTAACATCGTAAAGCTTTTAAAGATCCTCGAGCCGAGTCAGAAGAAAATAGCCATGGACTCTATCATTATACAAGCAAATTACAGGGAAAAGTATCCTGTGCATGGCTGTTGGGAGGAAATCTGTAGGCTACAATACCAAATTTGTTCGGCCGAAGAAGAGCTTCAACTTATTTATCAACAACTCGAGATTTGCAGACAACAACAACAACAAGTCCAATCCTTGCCTGATTATATGAATGTGGCATCACAATTAGAGTTGGGAATGGCTGCGCCGCCGAATACTAATAATGCACTGACACTCTTCAATCATAGTCCACAGCCACAAACTTATCATGACACAATAGCTGCGGCGGCTTTGCCTGCATCCCAACAACATTCCTACTCCAACAGCAACAGTGTTGATTACAATAATTGCTTTTACTTGGAATCCAAGGATGACACCACAAACATGTGGCTTCAGAATCATCCTTATGCAGATAATAGTAGCAATTCCATTGCAATGCAATCTCAGTTTCTTACCTCACACCAGCTAGCCATCCAACATGAAACTGTTGAAGATTATGAAGAGATGCACCCACTTTTTGATGCAATTGATGATAGGCAATCATGCATTTACTCTAAGGAAGCTTATGCTTCAAGTTCAGAAGAATCACTGAAAGATACGAGGAATTACGCCGAGCATGTTGCTGAAAATGAATTGAAGAACGCAGCTGCGTGCTTCAGCCTTACCAGTGTCAATTGA 888 0.4223 MTLKGGTTQACAACKYQRRKCTSECFLAPYFPADQPKVFLNVHKLFGVSNIVKLLKILEPSQKKIAMDSIIIQANYREKYPVHGCWEEICRLQYQICSAEEELQLIYQQLEICRQQQQQVQSLPDYMNVASQLELGMAAPPNTNNALTLFNHSPQPQTYHDTIAAAALPASQQHSYSNSNSVDYNNCFYLESKDDTTNMWLQNHPYADNSSNSIAMQSQFLTSHQLAIQHETVEDYEEMHPLFDAIDDRQSCIYSKEAYASSSEESLKDTRNYAEHVAENELKNAAACFSLTSVN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0951 295 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
Lal7g0951 295 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 267 - -
Lal7g0951 295 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 267 - -
Lal7g0951 295 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0951 Lal-Chr7 15852695 15853890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0951 1 258 AS2 family AT3G47870 37.954 7.94e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal7g0951 LOB 4.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0951 - - lang:109357116 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0951 7 15852695 15853890 Lal7g0951 7 15852695 15853890 ECH
Lal14g1555 14 16216725 16217734 Lal7g0951 7 15852695 15853890 LSH
Lal7g0951 7 15852695 15853890 Lal19g1107 19 14691005 14692071 LSH