Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0950 ATGGACGGTGGCGATATTTCATTTTCCGATAAGGAGGAGGTTCTTGAGGATTTGCGTGACAATGACATTCTCTCGCGTGTTCCACTCCTCGATGCTCCTATACTCTTGTTCGTTTGTTTTCACAAAGCTGTGCGTTCTGAATTACGCTTGCTTCGTTGCTTCGCGGAAACGGCGTCGTTCGAGGATGATCCTCAACGAAGCAGAAAATCAATTATTAAGCTTCGAAGTAGGTTCCAGTTTCTTAAACTAGCTTATAAGTATCATTGCGCTGCAGAAGATGAGGTTATCTTCCTTGCACTGGATGTGCATGTGAAAAATGTGGCATGTACATATTCGCTTGAACATAGCAGCACCGATGAACTCTTCGAGTCTATCTTTCACTTCTTGGATGAGCTGATGGGTCCTAGTCAGAATTTTCCAAAGTTGTTCCAAGAACTTTTGTACTGTATTGGCATCTTGCAAACCTCCACTAACCAAAATATGCTGAAAGAAGAAGAGCAGGTTTTTCCTCTGTTGATGCAGAAATTATCTACTAAAGAACAGGCTTCACTTGTGTGGCAATTCATATGTAGTGTTCCTATAAAGTTGATAGAGGAAGTTTTGCCATGGATGGTATCCTTCCTTTCTGCAGACAAACAAACAGAAGTTACTCAATTTTTAAATGGAATTGCACCAATGGAGAAAGCACTTCAAGAGGTTTTGGTTTCTTGGGTTGGAAGCAAGAACCAAATCTTCGATGAGGCTTATTTTCAAATTGAAGAAGTTCAAGGTGCTGATGGTTCCATACATAAAGAAAGACCACTTAGGTTGAGTTCTTGCAATAAGAATTCCAATGAAATTTCAAGTTGGATGAAAATGAATGGTCTAGAAATAGAAGATGAGGTCAATCGGGTTGATGTTCTTCATCTCTGGCATGAGGCCATCAAGAAAGATTTGAAAGAAATTTTGAAAGAGCTTCATCTAATAAGAAACTCCAGCTTTTTTCAGAATTTAGATGCAACAATTATCCAAATAAAGTTCTTTGCCGATGTCCTCATCTTTTACAGCAATGCTCAGAAGACATTGTTTCATCCTGTACTGAATAAACCTGCTTATGACTGGTTGCCCAAGTCTAGTGAACAATTTCTTGGTGAAAGTCACATTGAAGATTTACAGCAGTTGCTATGTAATTCGGAAACTGGAATGCCTTTGTGCAGCTTCATAGAGGAGCTTTGCAGAAAACTTGAATTATTTGTATCCGGAGTCAACAAACAATGTGCTTTTCATGAAACTGTGGTATTTCCTGCCATTAACAAGAACTGCAGAAACGGAATACAAGAGAGACTTTTGGCCTCGAGCTTGAAAATGATGCCACTTGGGTTACTTAGATGTGTTATAAATTGGTTTTCAGTTCACTTATCTGAAAAAGAATCCAGGTTCATTCTCTCTTGCATAAAGAAAGGAAATCTTTTCGTCAGTGAAGCTTTTTCATCGCTATTACATGAGTGGTTCCGCATTGGTTATTCAGGTAAAACCTCCATTGAGAAATTCCGACAAGACTTGCAGCATATGTTCAAAAGTAGGTGGTCTTTTTTGCCTGAGAAAATTATGGAAGGGCCTGGGTTTTCTTTATTAATTTCTGATCAACATCCCAATAAAGTCTCTGGCAAGAATTGTTTGTCCTATTCCTCATCTTGTGGGTCAAACAACTCATATAAGTATGAGACACCATACTCCACTGGAATTAATCTGCATATATTTTTCCCTGCCACAATTAGGAGGTTACATCGGAGTTCTAGATTTCATGCATCAAATAGTTCTTCCATTTCCTTTCTTTGTGATCCAAAACCAATTGACTTAATATTTTTTTTTCACAAGGCTATCAGGAAAGATTTGGATTACCTTGTTCTTGGCTCAGCTCAGTTAGAACAAAATGCCAAGTTGCTTATGGATTTCCGCAAAAGATTTCATCTCATATGTTTTCTTCATCAAATCCATACTGATGCAGAGGATGAGCTAGTTTTCCCAGCCTTGGAGGCAAGGGGTAAACTCAAAAACATTAGCCATGCTTACACTTTTGATCACAAACTTGATGATGAGCACTTTGATAAAGTATCCCGGATCCTTGATAAGATGTCTGAATTACATCTTTCAGTTTCTACCATCGATTCAAATGTAAGGGATAATAGAATGCTAAGGCACCATCATTTATGCAGGAAGCTTCAACAAATGTGCAAGTCAACGCATAAGTTACTTTCTGACCATCTGAATCGTGAGGAAATAGAAATTTGGCCTATTATTAGGGAGTCCTTCTTGAATCGGGAGCAAGAGAAGATTATAGGATGCATGCTTGGAAGAATAAAAGCAGAAATATTACAGGATATGATACCTTGGCTAATGGGATCTTTAACACAAGAAGAACAACATGTTGTAATGCTCTTATGGTCTATGGCTACTAAAAACACAAGTTTTGATGAATGGTTAGGTGAATGGTGGGATGGGTACAGTATAGCTAAGGAAACAGAGGGATCAAATGATGAACCTCTCCCTACCATTGACCCACTGGAGGTGATATCCAAATATTTGTCTGAAGAAGTTCTTAACAAATTACAAGAAGAATCTTCTCCCAACAAAGGCATAAACTTTTTGCAGAAGGATCATATTGGCGTTAATGTTGACCTGTCTAACTACAATGCTGATGGCAAAGTTAAGGTTAATAGTGCAGAACAAAATAATAATGAATGTCCAAAATGCACAAACCAATTCCATGATAGCAAAAAACATGCTTGCAATCAAGTAACAGATATGACAAATTTGGTCAATAATGGTCAATCTTTTCAATTATTTGACAAGTCTGGGAATGACGATCGACTTCTGAAATTGAGTCAAGATGATTTGGAGATGGCAATAAGAAGGGTGTATCGTGACTCGTGCTTAGATCCCCAGAAGAAGTCATACATAATACAGAACCTACTAATGAGTCGCTGGATTATTAGTCGGCAGATCTCTTCTACAGAAGTCAATATGAAAAGTGATGGCCAGGAATTTCCTGGGAAGCATCCATCTTATAGGGACCCTCTCAAACTAATCTATGGTTGCAAACACTACAAGAGAAACTGTAAGCTTCTTGCTCCGTGCTGCAACCAACTTCATACCTGCATACATTGCCATAACGAGGTGTCAGAACCAGATCATTCACTTGACAGGAAATCTATTACAAAGATGATGTGCATGAAGTGCTTGGTGATCCAGCCAATCAGTGCTACATGCTCAACCATTTCTTGCGGTAACTTATCCATGGCAAAATATTATTGCAGGATCTGCAAATTATTTGAAGATGAAAGGGAAATTTACCACTGTCCATACTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGTGTTGACTACTTTCACTGTATGAATTGCAATGCTTGTATGTCTCGGTCTCTTATGGTACATACATGCAGGGAGAAACATTTAGACGGTAACTGTCCAATTTGCCATGAATATATCTTCACATCCTGTTCTCCCGTGAAAGCCCTCTCATGTGGTCATGTCATGCACTCCACATGTTTTCAGGAATATACATGCTTTAACTATACCTGTCCAATATGTAGCAAGTCGCTTGGAGACATGCAGGTATATTTTAACATATTAGATGCATTACTGACTGAAGAGAATGTTCCTGAAGAACTTTCGGGTCAAACTCAGGTTATATTATGTAATGACTGTGAAAAGAAAGGATCAGCTCCCTTTCACTGGCTTTACCACAAATGTCCTTATTGTGGTTCATACAACACCAGAGTTCTATGA 3792 0.3871 MDGGDISFSDKEEVLEDLRDNDILSRVPLLDAPILLFVCFHKAVRSELRLLRCFAETASFEDDPQRSRKSIIKLRSRFQFLKLAYKYHCAAEDEVIFLALDVHVKNVACTYSLEHSSTDELFESIFHFLDELMGPSQNFPKLFQELLYCIGILQTSTNQNMLKEEEQVFPLLMQKLSTKEQASLVWQFICSVPIKLIEEVLPWMVSFLSADKQTEVTQFLNGIAPMEKALQEVLVSWVGSKNQIFDEAYFQIEEVQGADGSIHKERPLRLSSCNKNSNEISSWMKMNGLEIEDEVNRVDVLHLWHEAIKKDLKEILKELHLIRNSSFFQNLDATIIQIKFFADVLIFYSNAQKTLFHPVLNKPAYDWLPKSSEQFLGESHIEDLQQLLCNSETGMPLCSFIEELCRKLELFVSGVNKQCAFHETVVFPAINKNCRNGIQERLLASSLKMMPLGLLRCVINWFSVHLSEKESRFILSCIKKGNLFVSEAFSSLLHEWFRIGYSGKTSIEKFRQDLQHMFKSRWSFLPEKIMEGPGFSLLISDQHPNKVSGKNCLSYSSSCGSNNSYKYETPYSTGINLHIFFPATIRRLHRSSRFHASNSSSISFLCDPKPIDLIFFFHKAIRKDLDYLVLGSAQLEQNAKLLMDFRKRFHLICFLHQIHTDAEDELVFPALEARGKLKNISHAYTFDHKLDDEHFDKVSRILDKMSELHLSVSTIDSNVRDNRMLRHHHLCRKLQQMCKSTHKLLSDHLNREEIEIWPIIRESFLNREQEKIIGCMLGRIKAEILQDMIPWLMGSLTQEEQHVVMLLWSMATKNTSFDEWLGEWWDGYSIAKETEGSNDEPLPTIDPLEVISKYLSEEVLNKLQEESSPNKGINFLQKDHIGVNVDLSNYNADGKVKVNSAEQNNNECPKCTNQFHDSKKHACNQVTDMTNLVNNGQSFQLFDKSGNDDRLLKLSQDDLEMAIRRVYRDSCLDPQKKSYIIQNLLMSRWIISRQISSTEVNMKSDGQEFPGKHPSYRDPLKLIYGCKHYKRNCKLLAPCCNQLHTCIHCHNEVSEPDHSLDRKSITKMMCMKCLVIQPISATCSTISCGNLSMAKYYCRICKLFEDEREIYHCPYCNLCRVGKGLGVDYFHCMNCNACMSRSLMVHTCREKHLDGNCPICHEYIFTSCSPVKALSCGHVMHSTCFQEYTCFNYTCPICSKSLGDMQVYFNILDALLTEENVPEELSGQTQVILCNDCEKKGSAPFHWLYHKCPYCGSYNTRVL 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0950 1263 ProSiteProfiles Zinc finger CHY-type profile. 1019 1090 IPR008913 GO:0008270
Lal7g0950 1263 SUPERFAMILY Zinc hairpin stack 1094 1148 IPR037275 -
Lal7g0950 1263 Gene3D nmb1532 protein domain like 607 777 - -
Lal7g0950 1263 Gene3D nmb1532 protein domain like 293 444 - -
Lal7g0950 1263 Gene3D nmb1532 protein domain like 33 190 - -
Lal7g0950 1263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1151 1201 IPR013083 -
Lal7g0950 1263 CDD Hr-like 40 170 - -
Lal7g0950 1263 SUPERFAMILY CHY zinc finger-like 1017 1084 IPR037274 GO:0008270
Lal7g0950 1263 Pfam CHY zinc finger 1026 1103 IPR008913 GO:0008270
Lal7g0950 1263 SUPERFAMILY RING/U-box 1145 1204 - -
Lal7g0950 1263 ProSiteProfiles Zinc finger RING-type profile. 1157 1199 IPR001841 -
Lal7g0950 1263 CDD RING-H2_Pirh2 1156 1199 - -
Lal7g0950 1263 Gene3D - 1228 1263 - -
Lal7g0950 1263 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 24 1263 - -
Lal7g0950 1263 CDD Hr-like 612 758 - -
Lal7g0950 1263 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 24 1263 - -
Lal7g0950 1263 SMART ring_2 1157 1198 IPR001841 -
Lal7g0950 1263 ProSiteProfiles Zinc finger CTCHY-type profile. 1093 1156 IPR017921 -
Lal7g0950 1263 Pfam Zinc-ribbon 1204 1261 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0950 Lal-Chr7 15841718 15852962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0950 609 853 C2H2 Transcription Factor Family AT3G18290 37.452 1.01e-48 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0950 K16276 - gmx:100802706 1981.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0950 7 15841718 15852962 Lal7g0950 7 15841718 15852962 ECH
Lal14g1554 14 16205707 16215150 Lal7g0950 7 15841718 15852962 LSH
Lal7g0950 7 15841718 15852962 Lal19g1507 19 17427566 17430784 LSH