Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0948 ATGTCACTACGATCTCCTTCTCCTCCACATGTTTCCGGCGAACCCCGATCTTCGCCGTCGCCGGAGACCGATTCACAAAACAACGGACCTGATTCCGGCAACCACGATGCCGCCTCCAACGCCGGAATAATCTCCACCATCAGGAGGAGCAACCGCCCTGCCCGAGCATGCACCATCCGCGCAGCTTCTCGACTCTACTCGGCATCGCAAAATACTGCGGCGAATGAACGGAAAGCCGCGAAGAAGGATTACCGGCGGGAGGACTCCCCATCGCCGTCGCCTCCGCCGTCGCAGCTACAACAATGCAGCAAGATCGTTACGCCGCTGGTGGAGCCACCCACGATGACGCAGTTGCCACGGTGGAACCTTCGGTGCATGTGGGAGTTAGCTTCCATATTCAATTTCTTGCATCTATTTAGGCCTCTTTTGAATATCTCAATAGAATTCTCTGCTGAAGAGTTTGAATCAGCTCTTCTTATCCCTAATGATACACTAAGTGATATACACATGCCTTTGCTCAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGGGATAGTTGGATAACTGTATTATGCAGGAAATTGAGAGCTTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGTTTCGCAAGGGGCGGAGATTGAAGCATATAAATCACTTGATCCCGGGGTTCGTGTTTTCATCCTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCAAAAATTATATTGACAACTCACTCAAACACGGTGTTCATCTTTCAACATTCCGTAAAGAGCGTGTTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAATAATTGGTCATAGGTTGTATCGAGAAATTAAGAAAACTGAAATAGTTCAAGTGAAGAAAGGGAAAGCAAGAGGTTCCCAGGTTCTTTCTAATACATCATACCAATGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCGGAGAAGCTTTTCTCAAGTAAAAATAGAACTGAGGCTAGTGTGGGGAAAAAGCTGAAGATTAACATGCTTCCTGAGATTGAGAAAGATCATAAGAGGAAGGAGAAGATGCTGAAAAAGCAGCACAGACAAGCACTTCTTCTTGATAATTACATGATTGTCGACGGCCTTGCTCCTGGGCGTGCACTTCGTGATAGGAAACCAGTTACCTACACTTTTGATGATTACGATCAGTCCATCAATGAGGCAATTAAAGTAACCAAACAGAAACAGTCATCCCCGGAACCTAGGCCCAGGAGAGAATCAGTAGCAAAACGTGAAGCTTTGACTAATGGTAAATTGAAGGGTCCTTCACATGCCGCCCAACATCAAAATTTTAGTATGTCATCTCCAAAACCATCTGACTCTGATTATGATGAGGAAGAGGAAGAGCATCAAATTGACACATTGGATCGAAGCAATCGTCGAAGAAAGAGACCTACACGGTATTCAGAGAAAGAATTTGTTGAAGCAGTATTAGATGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCAGTATATGATGAAGAATATCTCGAGAAGCGTAAGCAGAGAATGAAGTTTTCTAGTGGCTCTGAAGGGGATGAAGAATATCAGTGGGATGAAGATAATATCGAAGAGGAAGAAGAAGATTACGATGATGAAGATGAAGATTCCTCAAGCATCAGCGAGGATAGTGACGAACCTCGTAAAAGCAAGCAATTGCGAGGCCGTGCAAGGAGGGAAACTAGACGCAGGTCAGTGGATGAGATGCAGTCAGGTCTAAGACGCAGTAATAGGTCAACTAGAAACCGTATAAACTACCAGCAATATGAGGCATCAGAATCAGAAACAGAGTTTATTAAACCTGATAAGTCTAATGCGTCAGCTGATCAATCAGATGCCAGTGAGAATGGTGAATGTGTGATGGAAAGTGAAGATTCAGATGCCAATGATGGTGAAGATCAGGAAATGAAAGTAGAGGATGAGCCTGCTACTGCTTATCCTGCAGTAGAAGACATTGAACAAGACCAAAATCCTGAAAAATCAAGTAGTCCTGGTCAGGAGGAAGTTGAGGGTGTCGGAAAGAGACATTTCCTTGATCTAAATGAACTTGCCCCTACCTCTGGTTTTGATGATGGTCCAAATACAATCATGAAAGATGAAGACACAGATTACTGA 2208 0.4411 MSLRSPSPPHVSGEPRSSPSPETDSQNNGPDSGNHDAASNAGIISTIRRSNRPARACTIRAASRLYSASQNTAANERKAAKKDYRREDSPSPSPPPSQLQQCSKIVTPLVEPPTMTQLPRWNLRCMWELASIFNFLHLFRPLLNISIEFSAEEFESALLIPNDTLSDIHMPLLKAIPPITRMALTRDSWITVLCRKLRAWWHWVADGDLPIVVSQGAEIEAYKSLDPGVRVFILKALCDIRVEQEDIKNYIDNSLKHGVHLSTFRKERVGGDSHGISYWYEDDPIIGHRLYREIKKTEIVQVKKGKARGSQVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNRTEASVGKKLKINMLPEIEKDHKRKEKMLKKQHRQALLLDNYMIVDGLAPGRALRDRKPVTYTFDDYDQSINEAIKVTKQKQSSPEPRPRRESVAKREALTNGKLKGPSHAAQHQNFSMSSPKPSDSDYDEEEEEHQIDTLDRSNRRRKRPTRYSEKEFVEAVLDEADFDSDDDIVGEAVYDEEYLEKRKQRMKFSSGSEGDEEYQWDEDNIEEEEEDYDDEDEDSSSISEDSDEPRKSKQLRGRARRETRRRSVDEMQSGLRRSNRSTRNRINYQQYEASESETEFIKPDKSNASADQSDASENGECVMESEDSDANDGEDQEMKVEDEPATAYPAVEDIEQDQNPEKSSSPGQEEVEGVGKRHFLDLNELAPTSGFDDGPNTIMKDEDTDY 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0948 735 MobiDBLite consensus disorder prediction 450 466 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 16 47 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 68 101 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 649 668 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 418 735 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 425 441 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 507 522 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 544 572 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 523 543 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 480 506 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 634 648 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 603 625 - -
Lal7g0948 735 MobiDBLite consensus disorder prediction 1 54 - -
Lal7g0948 735 Pfam DDT domain 131 176 IPR018501 -
Lal7g0948 735 PANTHER REMODELING AND SPACING FACTOR 1 35 734 IPR028938 GO:0006355|GO:0031213
Lal7g0948 735 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 35 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0948 Lal-Chr7 15822588 15829229 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lal7g0948 DDT 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0948 - - lang:109362853 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0948 7 15822588 15829229 Lal7g0948 7 15822588 15829229 ECH
Lal7g0948 7 15822588 15829229 Lal17g0976 17 7928551 7936397 PCT
Lal17g0976 17 7928551 7936397 Lal7g0948 7 15822588 15829229 PCT