Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0945 ATGGAACCTCCTATCATCAATGACTCCACCTTCTCTTCTTCTTCTTACTCCTTCTCTGATATTTGGCCTATGCAGCCTCCTCAAATTCTCGATGCTTCGGCCGAAAACTCGACGGTAACCCATCATTCTACAAATGATAGAAAGAGGAAGGACACTAGCTCTCCTACTACTCCAAATAACTTGAATGATTCTGGCAATAAACATATAAAATTGACCGAAGCCGATGCGATTTCAGCGTCGTGTGACAAATTAGATGAACAAAGCACTAAACCTTCTGAGCAACCACCTAAGCAAGATTATATCCATGTCAGAGCAAGAAGAGGCCAAGCCACTGATAGCCACAGTCTTGCTGAGAGGGCAAGAAGAGAAAAAATCAGCGAAAGGATGAAGATTCTGCAAGATATAGTCCCTGGATGTAACAAGGTAATTGGTAAAGCACTTGTCCTAGATGAGATAATCAATTACATCCAGTCATTGCAGCAGCAGGTTGAGTTCCTTTCAATGAAGCTTGAAGCAGTTAATTCCAGATTGAACATGAATCCTACTATTGAATGTTTTTCTTCAAAAGATGTTGGTACTCAGCCATTGGACCTTGCCGGAATGATATTTGGATCACAAGCAGCCAGGGGGTATGCTCAGGGATCACAACCTGGATGGCTGCATATGCAGATAGGTGGTGGTTTCGAGAGAGCGACATAA 699 0.4278 MEPPIINDSTFSSSSYSFSDIWPMQPPQILDASAENSTVTHHSTNDRKRKDTSSPTTPNNLNDSGNKHIKLTEADAISASCDKLDEQSTKPSEQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRLNMNPTIECFSSKDVGTQPLDLAGMIFGSQAARGYAQGSQPGWLHMQIGGGFERAT 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0945 232 Gene3D - 106 183 IPR036638 GO:0046983
Lal7g0945 232 PANTHER BNAC05G07950D PROTEIN 66 232 - -
Lal7g0945 232 Coils Coil 156 176 - -
Lal7g0945 232 MobiDBLite consensus disorder prediction 1 68 - -
Lal7g0945 232 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 66 232 IPR024097 GO:0006355
Lal7g0945 232 CDD bHLH_AtBPE_like 99 182 - -
Lal7g0945 232 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 109 159 IPR011598 GO:0046983
Lal7g0945 232 MobiDBLite consensus disorder prediction 1 22 - -
Lal7g0945 232 SMART finulus 115 165 IPR011598 GO:0046983
Lal7g0945 232 Pfam Helix-loop-helix DNA-binding domain 113 160 IPR011598 GO:0046983
Lal7g0945 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 179 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0945 Lal-Chr7 15797861 15800415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0945 1 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 47.018 1.04e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal7g0945 HLH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0945 - - gmx:100799646 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0945 7 15797861 15800415 Lal7g0945 7 15797861 15800415 ECH