Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0944 ATGTCTTTCAATTTTACCGCCGCTGACTCCGCCGTCTCCGGCGACCGTGCCGCCGGCGAATTCACGCTGTTCGGGGTTAGGGTTGTGGTTGATTCGATGAGGAAGAGTGTTAGTTTGAACAATCTTTCACATTATGAGATTCCACAAGATGCCTCTTCCAACAACAATAACACAAGCAACAAAGATGTTATCGCCGCCGGTTATGCCTCCGCCGATGACGCCATGCCTCATAACTCCGCCAAGCTCCGCGAGCGCAAGAGAGGTATTCCGTGGACGGAGGAAGAACACAAGCTGTTTTTGGTGGGATTGCAGAAAGTGGGGAAAGGTGATTGGAGAGGAATCTCCAGGAACTATGTCAAGACTAGAACCCCCACCCAGGTTGCTAGCCATGCTCAGAAATACTTTCTCCGCCGCACTAACCTCAACCGCCGTCGCCGTAGATCTAGCCTCTTTGACATCACCACTGACACTGTTTCAATGGAGGAAGAACAGATCCAGAATCAAGACAGTGCGTCTCATTCACAATCTATGTGCCCTGCAACCACTGAAGCTAGCAACATGAGTGGATTTCAAGTGATGCCGATGTATCCGATGGGCATTGGTTCTGGAATGTTTTCAGTCCAGGCTGAGAATCCCATGGAAGAACTCACTTTGGGTCAAGGAAGCATGGAACACAATGTTTCAACCAACCAAGTTCTTCCAATTCCTAATGCTACCACAATGTCTGATATTGCCTCCAATTCAAGTTCAACTTTTGATCCACCAACACTGTCCCTTGGGCTATCCTTCTCATCCGATCAAAGGCAAACATCCTCAAGACATTCACCTTTGCCTGCAATACCTCGTTTCAATAATGGAGACAGCATCATAAGCGTTGCTTGA 882 0.483 MSFNFTAADSAVSGDRAAGEFTLFGVRVVVDSMRKSVSLNNLSHYEIPQDASSNNNNTSNKDVIAAGYASADDAMPHNSAKLRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDTVSMEEEQIQNQDSASHSQSMCPATTEASNMSGFQVMPMYPMGIGSGMFSVQAENPMEELTLGQGSMEHNVSTNQVLPIPNATTMSDIASNSSSTFDPPTLSLGLSFSSDQRQTSSRHSPLPAIPRFNNGDSIISVA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0944 293 ProSiteProfiles SANT domain profile. 91 139 IPR017884 -
Lal7g0944 293 SMART sant 87 137 IPR001005 -
Lal7g0944 293 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
Lal7g0944 293 CDD SANT 90 135 IPR001005 -
Lal7g0944 293 MobiDBLite consensus disorder prediction 258 278 - -
Lal7g0944 293 Gene3D - 89 141 - -
Lal7g0944 293 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Lal7g0944 293 SUPERFAMILY Homeodomain-like 85 139 IPR009057 -
Lal7g0944 293 MobiDBLite consensus disorder prediction 258 293 - -
Lal7g0944 293 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 17 293 - -
Lal7g0944 293 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 137 IPR006447 GO:0003677
Lal7g0944 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Lal7g0944 293 PANTHER KIN2 17 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0944 Lal-Chr7 15789900 15796345 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal7g0944 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0944 - - aip:107632799 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1545 14 16157945 16160207 Lal7g0944 7 15789900 15796345 LSH
Lal7g0944 7 15789900 15796345 Lal19g1103 19 14673865 14676131 LSH