Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0930 ATGAGCAGAACCATTCTACTTGAAGCTCCACAAAAGGATGATGATATTGGTAATTTGAAATACTCATCTCAAATCCAAAATCGTTATGAATATTATGATGGTAATGTTAGTAATGAAAAAGAATCAACACCTTCTTCATCTTTATCTATTAGCAGTATCAGTCCATTGATCTTGTTGGTTATTATAGTTCTAGCAATTATTTTCTTCATCTATGGACTTATACATTTAGTTCTATGGTTTCTTATGAAAAGATCACCACCCTCTTCATCTCTTTACAACTCCAATAGATTTCAAGAATCCAACCATTCACGTTCTCTTCAAAGACAACTTCAACAGCTTTTCCGTTTGCATGATTCAGGTCTAGACCAAGCACTCATAGATTCTCTTCCTATTTTCTATTACCAAGATTTGTTAGGGTTAAAGGAACCATTTGATTGTGCTGTGTGTCTATGTGAGTTTTCAAACAAAGACAAGCTGAGATTGGTTCCATTATGCAGCCATGCATTTCACATGAATTGCATTGATACATGGCTTCTCTCAAACTCAACATGTCCTCTTTGTAGAGCACCTCTTTCCACCTCTACTTGCCCATTGGAGAATCAAATATTGAATATGTTGAGAATCACAAACGAGGAAGATAACGAGTATCAACACACTACTACGTCAGAATTCACATTTAACAACGGTCGTTCAAAGGGTCTAACTGAAGAAGAACAAATTAGTAAGAAAAGGGTGTTTTCAGTGAGAAATAATGGATTGAAGGGTGGAGATATAGGAGTAGTAGTAGAGAGTAGTAGTCATAGTCATAGTAGTTATGATGTGAGGAGATGCTACTCAATGGGTTCATATCAGTATATGGTTGCTGATTCAAATTTGCAAGTTGTGTTATCACAATTATCTCAGTATGAGAGAGGGAGTGAAGTGAATGGGAATGTGGATGGAAGGAAGATAGAGAATAGAACAAAAGGTGAGAGCTTTTCTGTTTCAAAGATATGGCTTTGGTCCAAGAAGAGCAGATATCATAGTTCTTCTTCTTCTTCTTATGTTGTTTTCCCTTGA 1059 0.3598 MSRTILLEAPQKDDDIGNLKYSSQIQNRYEYYDGNVSNEKESTPSSSLSISSISPLILLVIIVLAIIFFIYGLIHLVLWFLMKRSPPSSSLYNSNRFQESNHSRSLQRQLQQLFRLHDSGLDQALIDSLPIFYYQDLLGLKEPFDCAVCLCEFSNKDKLRLVPLCSHAFHMNCIDTWLLSNSTCPLCRAPLSTSTCPLENQILNMLRITNEEDNEYQHTTTSEFTFNNGRSKGLTEEEQISKKRVFSVRNNGLKGGDIGVVVESSSHSHSSYDVRRCYSMGSYQYMVADSNLQVVLSQLSQYERGSEVNGNVDGRKIENRTKGESFSVSKIWLWSKKSRYHSSSSSSYVVFP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0930 352 ProSiteProfiles Zinc finger RING-type profile. 146 188 IPR001841 -
Lal7g0930 352 SUPERFAMILY RING/U-box 125 195 - -
Lal7g0930 352 SMART ring_2 146 187 IPR001841 -
Lal7g0930 352 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 344 - -
Lal7g0930 352 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 17 344 - -
Lal7g0930 352 Pfam Ring finger domain 145 188 IPR001841 -
Lal7g0930 352 CDD RING-H2_PA-TM-RING 145 188 - -
Lal7g0930 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 199 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0930 Lal-Chr7 15703111 15704169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0930 72 345 C3H Transcription Factor Family AT2G18650 38.835 5.63e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0930 - - aprc:113846147 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0930 7 15703111 15704169 Lal7g0930 7 15703111 15704169 ECH