Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0917 ATGGACCTTGATACAGATCATAGAGAAAACTATGCCTCACAGCCAATGCATCTGCAAGAAAACTACTTGAAACCCGGCACGAAAGATGAGCTTCCTTTTGCGGCTCCTTCGTCGCAGGGTTTCATGCAAGACTTTCAACATGTTGATCAGTTTCATCATGCTAATGCCTCTTCATCCAATCAAAATTTTGGGGTCCAAACTCAAAATTTTGATCCTTTTGTTAATATAATCTGTGGATGTTCACAGGCAGATTTTGAAGGTTATGAGTGCAAGCCTTTTGTTGAGAATAATGGTAATGTTAACCATGCTCATGTTATGGAAGATTTCCAATATGAAGGCTATAGTATGAACCTCCCTAGAAGGAATCAAATGGATATGATGCCTTCAAACCAAATCTATTTGCCCTTTAATCCTCTAGAAACCAAACCTTTGAACTTTGTTGCACCTGATGAAGTCTCATGCATATCAGCAACAAATTATTACAGAAGATTTGGCTTGAATAGAAATAATAAGACATCTCCTACCACTAGAAGGTCATGTAAAGTTAAGAAGAAGCCCAACATAGTGAAGGGGCAATGGAGTGAACATGAAGACAGATTGTTGATTCAATTGGTGGAACAATATGGAGTGAGGAAGTGGGCTCATATTGCTCAAACCTTGCCTGGCAGAATTGGCAAACAATGCAGAGAGCGATGGCATAACCATCTAAGGCCTGACATTAAGAAGGAAATATGGACTGATGAAGAGGATAAGATACTGATCCAAACTCATGCAGAGATAGGAAATAAGTGGGCAGAGATTGCAAAAAGATTGCCAGGAAGAACTGAAAACTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCCAAAAGAAAATGCCGCTCAAAGTACCCAAGAGGCACTATTCTTCAGGACTATATCAAGAGCTTGAACTTAGACAAAAACCCTCCAATAGACTATAGAAGAAGATCTTCTGTTAATGCTATGAGAATAAAAGCTAGTGCAAGCAAAATAGCAGCAGCAGCAGCAGCTACAGCTACTCAGCCACATAGTACAAATCAAGTTAGTCCTAATGACCGGTTGGTCCCGAATTATGAGTTTAATGAGGTCCCAGATTTTTGTTTCAATGATGATATGTTTAAGGAAGGATGCAGTATTGATTCTTTGCTAGATGATATGCCTTGTGCTCCTACTATGGATGAGAAAGATTTTGATGGAAAAATGCAATGTGCTTCTAACATGAAGGGAAAACAAGTTGTTGATGTTGATTTTGAGACAGAGATGCCACAAGAAATGGGAGGGAATGAAGTTAAGAAGGAGCTGGATTTGGTGGAAATGATGTCTCAGGTTAATCAAAGCTCTAATAACTAA 1380 0.3891 MDLDTDHRENYASQPMHLQENYLKPGTKDELPFAAPSSQGFMQDFQHVDQFHHANASSSNQNFGVQTQNFDPFVNIICGCSQADFEGYECKPFVENNGNVNHAHVMEDFQYEGYSMNLPRRNQMDMMPSNQIYLPFNPLETKPLNFVAPDEVSCISATNYYRRFGLNRNNKTSPTTRRSCKVKKKPNIVKGQWSEHEDRLLIQLVEQYGVRKWAHIAQTLPGRIGKQCRERWHNHLRPDIKKEIWTDEEDKILIQTHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGTILQDYIKSLNLDKNPPIDYRRRSSVNAMRIKASASKIAAAAAATATQPHSTNQVSPNDRLVPNYEFNEVPDFCFNDDMFKEGCSIDSLLDDMPCAPTMDEKDFDGKMQCASNMKGKQVVDVDFETEMPQEMGGNEVKKELDLVEMMSQVNQSSNN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0917 459 SUPERFAMILY Homeodomain-like 187 283 IPR009057 -
Lal7g0917 459 Gene3D - 189 242 - -
Lal7g0917 459 CDD SANT 245 287 IPR001005 -
Lal7g0917 459 Gene3D - 243 304 - -
Lal7g0917 459 PANTHER MYB PROTEIN-RELATED 116 391 - -
Lal7g0917 459 Pfam Myb-like DNA-binding domain 245 284 IPR001005 -
Lal7g0917 459 Pfam Myb-like DNA-binding domain 190 236 IPR001005 -
Lal7g0917 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 185 240 IPR017930 -
Lal7g0917 459 PANTHER BNAC07G50190D PROTEIN 116 391 - -
Lal7g0917 459 ProSiteProfiles Myb-like domain profile. 237 287 IPR001005 -
Lal7g0917 459 SMART sant 189 238 IPR001005 -
Lal7g0917 459 SMART sant 241 289 IPR001005 -
Lal7g0917 459 CDD SANT 193 236 IPR001005 -
Lal7g0917 459 ProSiteProfiles Myb-like domain profile. 185 236 IPR001005 -
Lal7g0917 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 241 291 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0917 Lal-Chr7 15631707 15633667 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0917 123 403 MYB Transcription Factor Family AT4G18770 56.419 3.46e-101 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal7g0917 Myb_DNA-binding 3.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0917 K09422 - gmx:100816653 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1076 19 14486446 14488482 Lal7g0917 7 15631707 15633667 ECH
Lal7g0917 7 15631707 15633667 Lal7g0917 7 15631707 15633667 ECH
Lal7g0917 7 15631707 15633667 Lal19g1076 19 14486446 14488482 LSH
Lal21g0733 21 6005654 6007672 Lal7g0917 7 15631707 15633667 PCT