Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0912 ATGGGTCGCCATTCCTGTTGTGTAAAGCAAAAATTGAGGAAAGGTTTATGGTCCCCTGATGAAGATGAAAAGCTTTTCAATTATATAACCAGATTTGGTGTTGGATGCTGGAGTTCTGTTCCTAAACTAGCTGGACTTCAAAGATGTGGCAAGAGTTGCAGGTTGAGATGGATAAATTATTTGAGGCCTGATTTAAAGAGAGGAATGTTTTCACAGCAAGAAGAGGATCTTATAATAAGTCTCCATGAAGTCCTTGGAAACAGGTGGGCTCAGATTGCAGCACAGTTACCGGGAAGAACAGATAACGAGATAAAAAACTTATGGAATTCATGTTTGAAGAAGAAACTATTGAAACAAGGGATTGACCCAACAACACACAAGCCTCTCAATGAAGCTAATGTAAAAGAAGAGAAAACCAGCACAGAATCACCACCACAAATGCAAATACCAATAATTTCTACAAGCCCTTCAGCTACAACAACCTTATTATTTTCATCACAATGTTCACCAGTTATAAGCCACTCGAATTACTATGATGATGGAAGGTTAGAAGAAGCATCAAGAGAAATTTTCATGAACAAGCATGTATTAGATTTAGACCCTTTATCTTACAATGATAATTTCCAAATGAGTGTTGCACAAAACTCTTGTTATGGATTACCTATGAGTAGTAATTATCAAACAAGCATTAGAACATTGTTTGATCAGAACCAGTTTGGAACAAATTCAAGGTATGGTTTCTCTTCAATGCCAAGTCTAACCAATTCAGATCATGTGTCGGTGACAGAGTTTTCTTCAGATAACAACTCAGGTTCTAAAATCAGTTCCTTGTTCATGAATGATAGTAATAACATTAATCAAATGAAAGAAAATTCCAGCAATAATAGCTCAAACATGAGCATTTATAATGCAGGAGGAGAAGGGTGTCATCAAATGATGGAAAATGCTTCAGGGTTCTGTTGGGATGCTGAGAACAAATTAGACCATTCGTTTCAGTTCAATGCTATAAAATCAGAAGATTTCAAGACATGTAATTCATGGGAAGAAGAAGGGCAACAGAATTTGCAGAATCATGTTTCAATAGATTTCAGTTGCTATCCATTAACATCACTGTCAGAAGATCTAACAGGAACAAGTTTTGATATATTCCAGCAAATATGA 1161 0.3609 MGRHSCCVKQKLRKGLWSPDEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNLWNSCLKKKLLKQGIDPTTHKPLNEANVKEEKTSTESPPQMQIPIISTSPSATTTLLFSSQCSPVISHSNYYDDGRLEEASREIFMNKHVLDLDPLSYNDNFQMSVAQNSCYGLPMSSNYQTSIRTLFDQNQFGTNSRYGFSSMPSLTNSDHVSVTEFSSDNNSGSKISSLFMNDSNNINQMKENSSNNSSNMSIYNAGGEGCHQMMENASGFCWDAENKLDHSFQFNAIKSEDFKTCNSWEEEGQQNLQNHVSIDFSCYPLTSLSEDLTGTSFDIFQQI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0912 386 MobiDBLite consensus disorder prediction 123 148 - -
Lal7g0912 386 CDD SANT 70 109 IPR001005 -
Lal7g0912 386 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lal7g0912 386 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lal7g0912 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lal7g0912 386 PANTHER MYB TRANSCRIPTION FACTOR 1 380 - -
Lal7g0912 386 CDD SANT 17 61 IPR001005 -
Lal7g0912 386 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lal7g0912 386 Gene3D - 11 67 - -
Lal7g0912 386 PANTHER MYB DOMAIN PROTEIN 55 1 380 - -
Lal7g0912 386 Gene3D - 69 144 - -
Lal7g0912 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lal7g0912 386 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lal7g0912 386 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lal7g0912 386 SMART sant 66 114 IPR001005 -
Lal7g0912 386 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0912 Lal-Chr7 15588378 15590087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0912 1 141 MYB Transcription Factor Family AT1G57560 79.433 6.58e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal7g0912 Myb_DNA-binding 7.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0912 K09422 - gmx:100811140 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0912 7 15588378 15590087 Lal7g0912 7 15588378 15590087 ECH
Lal14g1499 14 15895313 15897259 Lal7g0912 7 15588378 15590087 LSH
Lal7g0912 7 15588378 15590087 Lal19g1057 19 14342837 14344834 LSH