Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0907 ATGAACCACTTCGACAACAGATATTCCGACGCTACTTCTTATCGTAACCGTCGCACTGATCTAGTTGGATCTATGCCTCATCCTTCTGCAACCTACGGCCGCGGTGCTCCTGCTCCATACGGTGGTCCTCCGGTTCCGTATTCTTCTGGAAGAGGAGCACCTAATGGTTATGGATCGGGACCCGCTCCCCCGGTTTCCCCATTTATACCGCCTTCTGGTGGTTTTAATATAGGCCGAGGGGGTGGTTTTGGTGATAGATTCGGTAACGGTCATTTCAGCGATAGAAAGGATGACCTAGGTCGTCATGGTGGTGGAAGAGAACGTGGTGGTGGTTTTATCTCTGGTCGTGGCGGTGGTAGAGGTGGAAATTATGGTTTTAGGGGTTCGGGGAGAGGAGGGATGGGAGGTAGAAGTTATGGTAGTGGTGGTGGTCGTGGTGGTAGGCATGGTGGTTCATCTAAGGGTGATTTGGATAATATTTCTCTACCAAGGCAGGATTTTAGAAATTTGGTGCCTTTTGAGAAGAATTTTTATGTTGAAAGCCATTCGGTGAGTGCTATGTCTGAGCAAGAAGTTATGCATTACCGTGCTACTAGGGAAATCACCGTGCAAGGGAATGATGTGCCAAGACCGATTCGAACGTTCCAGGATGCTAACTTTCCTGGTTATTGCATGGACGTCATTGCCAATTTGGGTTTTGTCGAGCCAACTGCAATTCAGGCTCAGGGTTGGCCCATGGCTCTGATGGGTAGAGACTTGATTGGCATTGCTGAGACTGGCTCTGGTAAAACATTGTCATATCTGCTTCCTGCTTTTGTGCATATCAGTGCGCAACCTCGACTGTCACCAGGTGATGGTCCTGTTGCCTTAGTTTTAGCACCAACTAGAGAGTTAGCTGTCCAAATTCAAGAAGAAGCATTGAAATTTGGGGCACGAACACATATTAGAAGTACATGCATATATGGTGGTGCACCAAAGGGCCCTCAAATTCGCGACCTGAGAAGAGGTGTTGAGATTGTTATTGCTACACCTGGTCGACTAATAGATATGTTGGAAGCTCAGCACACGAACTTGAAGAGAGTTACTTACCTTGTCTTGGATGAAGCTGATCGAATGTTAGACATGGGTTTTGAGCCTCAGATACGGAAAATTGTTGGCCAGATTCGACCAGATAGGCAGACATTGTATTGGAGTGCTACATGGCCAAGGGAGGTTGAAAAGCTGGCAAGGCAGTTTCTGCGCAACCCATATAAGGTAATTATTGGATCAGCTGAACTGAAAGCAAATCAATCTATAAATCAAATTGTCGAAATTATTACTGACATGGAGAAATACAATAGATTGATCAAACTGCTGAAAGAAATGATGGATGGTAGCCGAATCCTTATATTTATGGAAACAAAAAAGGGCTGTGACCAAGTTACCAGACAATTGAGAGTAGATGGATGGGCAGCGCTGTCCATCCATGGTGATAAAAACCAGGCAGAAAGGGACTGGGTTTTGGCTGAATTTAAGAGTGGTAGAAGTCCAATAATGACCGCCACTGATGTTGCTGCACGGGGTCTTGATGTGAAAGACATAAAATGTGTAATCAATTATGATTTTCCCACCAACTTGGAAGATTATGTCCACAGAATTGGCCGAACTGGTCGTGCTGGGGCTAAAGGAACTGCATACACCTTTTTTACACATTCCAATGCGAAGTTTGCTAAGGAGCTGATCAAGATTTTACAAGATGCCGGCCAGGTTGTGAATCCTGCATTGATTGCTTTGGCTCGGACAGCTGGTTCTGGTCAATTTGGATCTGGAGGAGGTTTTCGCTCCAGAGGTCGTGTAGGCGGTGGCTACGGCAATCGGTCAGGATCAAATGCCGTTCCAGTAGGTTTTAAGAGGCACTGGTAG 1902 0.4611 MNHFDNRYSDATSYRNRRTDLVGSMPHPSATYGRGAPAPYGGPPVPYSSGRGAPNGYGSGPAPPVSPFIPPSGGFNIGRGGGFGDRFGNGHFSDRKDDLGRHGGGRERGGGFISGRGGGRGGNYGFRGSGRGGMGGRSYGSGGGRGGRHGGSSKGDLDNISLPRQDFRNLVPFEKNFYVESHSVSAMSEQEVMHYRATREITVQGNDVPRPIRTFQDANFPGYCMDVIANLGFVEPTAIQAQGWPMALMGRDLIGIAETGSGKTLSYLLPAFVHISAQPRLSPGDGPVALVLAPTRELAVQIQEEALKFGARTHIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLYWSATWPREVEKLARQFLRNPYKVIIGSAELKANQSINQIVEIITDMEKYNRLIKLLKEMMDGSRILIFMETKKGCDQVTRQLRVDGWAALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVINYDFPTNLEDYVHRIGRTGRAGAKGTAYTFFTHSNAKFAKELIKILQDAGQVVNPALIALARTAGSGQFGSGGGFRSRGRVGGGYGNRSGSNAVPVGFKRHW 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0907 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 570 IPR027417 -
Lal7g0907 633 MobiDBLite consensus disorder prediction 1 62 - -
Lal7g0907 633 CDD SF2_C_DEAD 432 562 - -
Lal7g0907 633 Gene3D - 424 592 IPR027417 -
Lal7g0907 633 SMART helicmild6 472 553 IPR001650 -
Lal7g0907 633 SMART ultradead3 232 435 IPR014001 -
Lal7g0907 633 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 447 592 IPR001650 -
Lal7g0907 633 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 244 419 IPR014001 -
Lal7g0907 633 PANTHER LD32873P 166 604 - -
Lal7g0907 633 Pfam DEAD/DEAH box helicase 237 408 IPR011545 GO:0003676|GO:0005524
Lal7g0907 633 Pfam Helicase conserved C-terminal domain 443 553 IPR001650 -
Lal7g0907 633 Gene3D - 175 423 IPR027417 -
Lal7g0907 633 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 166 604 - -
Lal7g0907 633 CDD DEADc_DDX5_DDX17 225 419 - -
Lal7g0907 633 MobiDBLite consensus disorder prediction 86 161 - -
Lal7g0907 633 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 213 241 IPR014014 GO:0003724
Lal7g0907 633 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 365 373 IPR000629 -
Lal7g0907 633 MobiDBLite consensus disorder prediction 89 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0907 Lal-Chr7 15552855 15558110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0907 200 582 Eukaryotic Initiation Factors Gene Family AT3G19760 34.375 2.16e-67 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0907 K12823 - gmx:100817092 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0907 7 15552855 15558110 Lal7g0907 7 15552855 15558110 ECH