Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0893 ATGGCGGACCCGGAGGTTTTGCCGTGGCTGAAATCGCTTCCACTGGCTCCAGAATATAGACCAACCGCTGCAGAGTTTCAAGATCCAATTGCTTACATTTTCAAGATCGAAAAAGAAGCTTCTAGATACGGAATCTGTAAGATCATTCCTCCGGTTCCACCTTCTCCTAAGAAAACCGCTATTTCCAACCTCAACCGCTCTCAACCGTCTTTCACCACGCGCCAGCAGCAGATCGGGTTCTGCCCCCGCCGTCCTCACCCCGTGCGCCGCCCTGTCTGGCAGAGTGGGACCCACTACACTTTCAAAGAGTTCGAAGCCAAAGCCAAAGCATTCGAGAAAACCTATCTCAAGAAACACTACTCAAGCAAGAGTAATAATAACGGCGTCGCTCCTTCTGCGCTTGAAGTTGAGACTCTGTATTGGAAGGCCACGTTGGATAAACCGTTTTCCGTTGAGTATGCAAACGACATGCCCGGTTCGGCTTTCAGTCCGGCGAGCAATGGAGGTGAGAGTGTGGGTGACAGTGCTTGGAACATGAGAGTGGTTTCGAGGGCAAATGGGTCATTGTTGAGGTTTATGAAGGAAGAGATTCCTGGTGTTACTTCACCAATGGTTTATGTGGCTATGTTGTTTAGTTGGTTTGCTTGGCATGTTGAGGATCATGATTTGCATAGTCTTAATTATCTTCATTTGGGAACTCCAAAGACTTGGTATGGTGTTCCTAGAGATGCTGCATTTGCGTTTGAAGAAGTTGTTAGAGTTCATGGATATGGTGGAGAGATTAACCCTCTTGTTACTTTTGCTATCCTTGGTGAGAAAACTACAGTGATGTCGCCGGAAATATTTATTGGTGCAGGTGTTCCGTGTTGCAGGTTAGTTCAAAATGCTGGGGAATTCGTTGTGACATTCCCAGGAGCCTATCACACAGGATTCAGTCATGGTTTTAATTGTGGAGAGGCATCTAACATTGCGACACCAGAATGGTTGAGGGTGGCTAAAGATGCTGCTATTCGCAGGGCTTCAATAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGGCCTTGCTTTGTGTTCTAGAGTCCCTGCGGCCATCAGTGCTGAACCACGGAGTTCTCGACTTAAAGATAAGAGAAAAGGTGAAGGAGAAACTGTAATCAAAGAGTTATTTGTACAGGACGTGCTACAGAACAATGGCCTGCTTCATGTACTCGGCAGAGGATCTGCTATAGTACTTCTTCCTCATAGCTCTTCTGATTTCTCTGCTTGCTCAAAATTACGTGTTGGATCCCAACAACTAAAAGTGAACCCCGAGTCCATGAACGTAAGCAATTCGAAGGGAATAAATTCTTCAAAGGGTTTGATTTCTGATGACCTTGCTTTTGTCGCTAATCATGGAATCAAACAAGTTAAAGGTTTTTATTCTGTAAAAGAAAAGTTTGATACGCTGTGGGAAAGGAACATGATTTCTTCATTGAGTGTGGGTAGTAATATATGCACTTCAAGTTCGAAGGCACTACAAAAAGACGATGAAAGAGAAACAAGTCAAGGAGATGGGTTGTCGGATCAGAGACTATTTTCGTGTGTCACATGTGGAATATTAAGCTTTGCCTGTGTTGCTATTGTACAGCCTAGGGAACCAGCAGCTAGATCCCTTATGTCAGCTGATTACAGTTTCTTTAATGATTCGATTGTTGGTTCTGGAGTAACTAGCAATAACTTTACTGTTGTCCATGAAGGTGCAACCATTCCCAAGTCTAGCACAAGATGGACAGAGCAAAATGCCCAGAAATATTTATTTGATGCTCCTGTTAAATCTATCAAACAAAAAACACAGATTGCTGATCAAAATTATGTGGAGACTTTAAATACCGAACAAAGAAACGGCAGTACAGCTCTTTCCTTATTGGCTTCAGCATATGGAGATTCCTCTGACTCTGAGGAAGATCAGGGTGAATCAGATATTGCAGTTGAAGGTGATGAGTTGAACATGATTAATCATCCATCAGCAAGTAGATCTAAGGAGATATCTTGTTTGCCTTCTCACTCTCAAGATTGTCATGCCAGTCCAGGGGTTAGACTTGATAGAGGTGATATTCCTTCGAATAGTACTGAAAGTTATGAGGATTATATGCATAAGAGGGTTGAGTGCATTATGAGTCCTTCTGACTATGTTAAGCCAGAAGATTATGACATCACTTCAGGGGTTGCATTTAAAAATATGGCAGAAGTGCGTCATTCCATGTCGAATTGTTCCCAAGTTGCTGAAACATCACTGTTAGGGAAGGCTGTGATTCCTATCGATAAACATGTTTCATTGGTTCCACCGTCTGATGAAGACTCGTCCAGAATGCATGTCTTTTGTCTAGAGCATGCTGTAGAAGTAGAGAAGCAACTTCGCCCTATAGGAGGAGCACACATATTACTCCTATGCCATCCAGATTATCCCAAAATAGAGGCTGAAGCTAAATTTGTGGCAGAAGAACTGGGTATTGATTACACGTGGAAGAATACTGCATACAGGCATGCTAATAAAGATGATGAGGAAAAGATCCAATCAGCTCTGGACAGTGAGGAAGCTACTCCTGGGAATGGGGACTGGGCTGTAAAGCTGGGAATCAATCTCTTTTATAGTGCCAATCTTAGCCGCTCTCCACTTTATAGCAAGCAGATGCCTTACAATTCTGTTATTTATTATGCATTTGGTTGTAGCTCTCCAGCAATCTCACCCACAGAACCCAAGGTCTACCGGAGAAGGGGCAACAAGCAGAAAAAGGTAGTTGCTGGTAAGTGGTGCGGTAAAGTTTGGATGTCCAATCAAGTCCATCCCCTTTTAGTAAAAGAAGATGCTGAGGATGTTGTGGATGAGAAAAGCTTACATGGGTGGCCATTACATGATGAGAAAATTGAGAGATCAGAAGGCACCCACAAAAGCAACACTCTTAGAAACTCTGGTAGGAAAAGGAAAATGGCTGTGGAGAGTGGTGGATCCAGGAAAGGAAGTTTTGCCAAGAGTGATTGTCTTTCAGATGATTCAATTGAAGATAAATTGAATCATGACAAAAGGAGGATTCTTAGAAGCAAGAGAACCAGACATATTGAGAAAGATGACTCAGTTTCAGAGGGGGATTATTCTCCTCTGAAGCATCATAGGAAGCCTATAAGCAAGCTTACAAAAGGCATTGAAGGTGATGCAATTTCAGATGATTCGCTGGATGATAATTCTCATATACAGCATAGGAAGAATGCTAATGCCAAGGAAGCTGAATTTATTGAGAACGATGTGGTTTCAGATGATACAGTGGGCAATGATTTTGATTGCTCGCCCAGGGAAGAGCTTAGCAGCGAGCAAGATGCAATTTCAGAGGATTCATTGGGTGTTGGTTCTGTTCAGCTGCATAGAAAAACTCCTAAAAGCAAGCATGGCAAATACATTGACGAAGATGTGATTTCTGATGATGGCCGAATGGAGGTTTGTTTTCAGAAGCAGCAGAGGAGGAAACCTAAAACAAAGCAACGCAAATGCCTTGCTGAAAACATTACAATGATAAAGCAAAGCAAACAAGATAAACACCTTGCTGGAGAGGATATTATATCTGATGACCAACTGGAGCTTCATTCTCGCAAGTATCCAAGAAGGACTCCTAAAAACAAGCAAGCCAAGTGCATTGTTGGGAAAGATGTAATATCTGATGGTCAGTTGGAGAATCACTTTCAGAAGCACCAAAGAAGTGTTCCTAGGAGCAGGCAAATCAAATGTTGTGATAGAAAAATTATGGATGACTTGACTGAAAATAATTCTCATCTGCTGCATAGAACTCCTAAAAGAAGACAACCTAAATGCATTGATGAAGACAATATAAATTCAGATGATCAAATGGAGGTTGAATCTCTGCAGCATAGGAGAACTGTTCGTGGTAAGCAATCTAAATCACGGACTCTTCAACACATGAAACAAGCCAAATGCAAGGATGAAGACAGTGCAAATTCAGATGGTCAAATGGAGGATGATTCTCAGCAGTATAGTAGAACTGTTCGAGGTAAGAAATCTAAACCACGGACTCTTCAACAGATGAAACAAGCTAAATGGAAGGATGGAGAGGATATAAATTCAGATGATCAAATAGAGGATGATTCTCAGCAGAATAGGAGAACTGTTCGAGGTAAGAAATCTAAATCACAGATTCTTCAAAAAATGAAACAAGCTAAATGGAAGGATGAAGACAATATAAATTCAGATGACCAAATGGAGGATGATTGTCAGAAGAATAGGAAAACTGTTCGGAGTAAGCAATCTAAATCGCAGACACTGCAACAAATGAAACAAGCTAACTCTGTCCGTGTGAGAAGGCCGGCTTCTCAACCTGTGAAAAAAAGGGCCCAGACACAGATGAAATCAAAGACTCCTCTGAAAATGAAGCAGCTACCTTGTGTGCAGAATAATCGATCTGAAGAAGAGGAAGAGGAGGAGGAGGGAGATGGAGAGGAGGAAGTAGAAGTAACTGGACCTAGCACACGCCTTAGGAAGAGAGTCCCAAAATTTGAGGAGTCTGAAGGAAAATCAAAAGAAAAGGAAACCAAAAGGAAAGGTGTGAAGAGTGCTACAACTGCAAAGATTTCAGCTCGGCATGCCAAAATTAAGGAGGAGGTAGCAGAATACCAGTGTGACATTGAGGGGTGTACCATGAGTTTTGGGTCTAAACTGGAGCTGATGCAACATAAGAAAAATATTTGTCCTGTGAAAGGATGTGGCAAGAAGTTTTTCTCACACAAATATCTGGTTCAACATCGCCGAGTTCACGAGGATGACCGCCCCTTGAAGTGTCCTTGGAAGGGGTGCAAGATGACTTTCAAGTGGGCATGGGCTCGCACGGAACATATTCGAGTCCACACTGGTGCACGTCCTTATGTATGTGCTGAGCCGGGTTGTGGGCAAACATTCAGATTTGTTTCTGATTTCAGTCGTCACAAGCGGAAGACTGGTCATTCAACAAAGAAGAGTTGCTAA 5019 0.425 MADPEVLPWLKSLPLAPEYRPTAAEFQDPIAYIFKIEKEASRYGICKIIPPVPPSPKKTAISNLNRSQPSFTTRQQQIGFCPRRPHPVRRPVWQSGTHYTFKEFEAKAKAFEKTYLKKHYSSKSNNNGVAPSALEVETLYWKATLDKPFSVEYANDMPGSAFSPASNGGESVGDSAWNMRVVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHLGTPKTWYGVPRDAAFAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEIFIGAGVPCCRLVQNAGEFVVTFPGAYHTGFSHGFNCGEASNIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLGLALCSRVPAAISAEPRSSRLKDKRKGEGETVIKELFVQDVLQNNGLLHVLGRGSAIVLLPHSSSDFSACSKLRVGSQQLKVNPESMNVSNSKGINSSKGLISDDLAFVANHGIKQVKGFYSVKEKFDTLWERNMISSLSVGSNICTSSSKALQKDDERETSQGDGLSDQRLFSCVTCGILSFACVAIVQPREPAARSLMSADYSFFNDSIVGSGVTSNNFTVVHEGATIPKSSTRWTEQNAQKYLFDAPVKSIKQKTQIADQNYVETLNTEQRNGSTALSLLASAYGDSSDSEEDQGESDIAVEGDELNMINHPSASRSKEISCLPSHSQDCHASPGVRLDRGDIPSNSTESYEDYMHKRVECIMSPSDYVKPEDYDITSGVAFKNMAEVRHSMSNCSQVAETSLLGKAVIPIDKHVSLVPPSDEDSSRMHVFCLEHAVEVEKQLRPIGGAHILLLCHPDYPKIEAEAKFVAEELGIDYTWKNTAYRHANKDDEEKIQSALDSEEATPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGCSSPAISPTEPKVYRRRGNKQKKVVAGKWCGKVWMSNQVHPLLVKEDAEDVVDEKSLHGWPLHDEKIERSEGTHKSNTLRNSGRKRKMAVESGGSRKGSFAKSDCLSDDSIEDKLNHDKRRILRSKRTRHIEKDDSVSEGDYSPLKHHRKPISKLTKGIEGDAISDDSLDDNSHIQHRKNANAKEAEFIENDVVSDDTVGNDFDCSPREELSSEQDAISEDSLGVGSVQLHRKTPKSKHGKYIDEDVISDDGRMEVCFQKQQRRKPKTKQRKCLAENITMIKQSKQDKHLAGEDIISDDQLELHSRKYPRRTPKNKQAKCIVGKDVISDGQLENHFQKHQRSVPRSRQIKCCDRKIMDDLTENNSHLLHRTPKRRQPKCIDEDNINSDDQMEVESLQHRRTVRGKQSKSRTLQHMKQAKCKDEDSANSDGQMEDDSQQYSRTVRGKKSKPRTLQQMKQAKWKDGEDINSDDQIEDDSQQNRRTVRGKKSKSQILQKMKQAKWKDEDNINSDDQMEDDCQKNRKTVRSKQSKSQTLQQMKQANSVRVRRPASQPVKKRAQTQMKSKTPLKMKQLPCVQNNRSEEEEEEEEGDGEEEVEVTGPSTRLRKRVPKFEESEGKSKEKETKRKGVKSATTAKISARHAKIKEEVAEYQCDIEGCTMSFGSKLELMQHKKNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSC 1672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0893 1672 SMART JmjN_1 15 56 IPR003349 -
Lal7g0893 1672 ProSiteProfiles Zinc finger C2H2 type domain profile. 1580 1609 IPR013087 -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 969 1012 - -
Lal7g0893 1672 ProSitePatterns Zinc finger C2H2 type domain signature. 1582 1604 IPR013087 -
Lal7g0893 1672 SMART cupin_9 171 340 IPR003347 -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1269 1541 - -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1034 1065 - -
Lal7g0893 1672 SUPERFAMILY Clavaminate synthase-like 81 341 - -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1112 1143 - -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1030 1065 - -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1403 1430 - -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1434 1453 - -
Lal7g0893 1672 SUPERFAMILY beta-beta-alpha zinc fingers 1581 1613 IPR036236 -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1487 1502 - -
Lal7g0893 1672 ProSitePatterns Zinc finger C2H2 type domain signature. 1642 1666 IPR013087 -
Lal7g0893 1672 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Lal7g0893 1672 PANTHER LYSINE-SPECIFIC DEMETHYLASE 4 1097 - -
Lal7g0893 1672 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1377 1663 - -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1269 1291 - -
Lal7g0893 1672 Pfam JmjC domain, hydroxylase 204 322 IPR003347 -
Lal7g0893 1672 Gene3D Classic Zinc Finger 1578 1664 - -
Lal7g0893 1672 ProSiteProfiles Zinc finger C2H2 type domain profile. 1640 1671 IPR013087 -
Lal7g0893 1672 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 4 1097 - -
Lal7g0893 1672 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1377 1663 - -
Lal7g0893 1672 SMART c2h2final6 1640 1666 IPR013087 -
Lal7g0893 1672 SMART c2h2final6 1580 1604 IPR013087 -
Lal7g0893 1672 SMART c2h2final6 1224 1245 IPR013087 -
Lal7g0893 1672 SMART c2h2final6 1557 1579 IPR013087 -
Lal7g0893 1672 SMART c2h2final6 1610 1634 IPR013087 -
Lal7g0893 1672 Gene3D Cupin 9 344 - -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1503 1536 - -
Lal7g0893 1672 Pfam jmjN domain 17 50 IPR003349 -
Lal7g0893 1672 ProSiteProfiles JmjC domain profile. 171 340 IPR003347 -
Lal7g0893 1672 MobiDBLite consensus disorder prediction 1460 1483 - -
Lal7g0893 1672 ProSitePatterns Zinc finger C2H2 type domain signature. 1612 1634 IPR013087 -
Lal7g0893 1672 SUPERFAMILY beta-beta-alpha zinc fingers 1620 1664 IPR036236 -
Lal7g0893 1672 ProSiteProfiles Zinc finger C2H2 type domain profile. 1610 1639 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0893 Lal-Chr7 15414358 15422341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0893 787 888 C2H2 Transcription Factor Family AT5G04240 33.333 1.20e-14 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal7g0893 JmjC 3.8e-35 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0893 - - lang:109362418 3019.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0893 7 15414358 15422341 Lal7g0893 7 15414358 15422341 ECH
Lal7g0893 7 15414358 15422341 Lal19g1037 19 14184809 14194000 LSH